Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNA5SP510-201ENST00000364697 99 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AL096800.1-201ENST00000405326 893 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 GAPDHP57-201ENST00000424400 585 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 RN7SL216P-201ENST00000471607 298 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 OR7E99P-201ENST00000505750 922 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 OR4D12P-201ENST00000509361 911 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC009237.12-201ENST00000604755 742 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 EPS15P1-202ENST00000459691 2071 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AP003972.1-201ENST00000625192 5446 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 EIF3EP1-201ENST00000433978 1316 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 MORF4L1P4-201ENST00000450245 976 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 VPS25P1-201ENST00000455691 508 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC074386.1-201ENST00000476560 767 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 LECT2-205ENST00000522943 574 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 UG0898H09-202ENST00000623646 7040 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC079355.1-201ENST00000421770 223 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AL583856.1-201ENST00000454078 1101 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 RPS14P8-201ENST00000478778 369 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 PABPC1P1-201ENST00000506347 591 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC090022.1-201ENST00000546569 311 ntBASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SYNE1Q8NF91 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC008171.1-201ENST00000395058 200 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RN7SKP281-201ENST00000410472 352 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 SULT1D1P-201ENST00000458020 882 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LECT2-203ENST00000512872 762 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RNA5SP418-201ENST00000515951 117 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 MED21-206ENST00000546323 575 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AP000577.1-201ENST00000624366 878 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC005702.3-201ENST00000585345 1447 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 IGKV1OR2-3-201ENST00000411475 288 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 UBFD1P1-201ENST00000473259 814 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RN7SL369P-201ENST00000477138 299 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RNA5SP434-201ENST00000516647 121 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms