Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AP000547.3-204ENST00000588548 2523 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 AC110373.1-201ENST00000505994 3505 ntBASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.85□□□□□ -1.47
C9orf40Q8IXQ3 BIN2P1-201ENST00000504996 1530 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 RN7SKP121-201ENST00000410842 305 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC009237.1-201ENST00000442127 744 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 EEF1B2P3-201ENST00000447718 678 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 RN7SL326P-201ENST00000477493 296 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 SNX18P25-201ENST00000510539 758 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 uc_338.31-201ENST00000615595 186 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AL445649.1-201ENST00000615941 691 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AC010401.2-201ENST00000575137 4934 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 AL133243.2-201ENST00000610331 1621 ntBASIC5.84□□□□□ -1.47
C9orf40Q8IXQ3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
C9orf40Q8IXQ3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.84□□□□□ -1.48
C9orf40Q8IXQ3 TMCC1P1-201ENST00000518897 1980 ntBASIC5.84□□□□□ -1.48
C9orf40Q8IXQ3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
C9orf40Q8IXQ3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.84□□□□□ -1.48
C9orf40Q8IXQ3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 RNA5SP514-201ENST00000363717 111 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AL139805.1-201ENST00000407837 289 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 MIR1275-201ENST00000408770 80 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AL035422.1-201ENST00000414193 397 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 RPL23AP18-201ENST00000416139 468 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 CYP4F30P-202ENST00000420048 405 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AL645936.1-201ENST00000441979 518 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC104339.1-201ENST00000465478 348 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 RN7SL741P-201ENST00000482473 289 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC010343.2-201ENST00000510162 224 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC018797.1-201ENST00000510791 255 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 NPIPB14P-203ENST00000532298 987 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 MIR3154-201ENST00000577829 84 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 SMIM12P1-201ENST00000603004 274 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 MIR6721-201ENST00000617181 87 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 MIR6806-201ENST00000622141 64 ntBASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
C9orf40Q8IXQ3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms