Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC092266.1-201ENST00000610958 165 ntBASIC7.09□□□□□ -1.27
HERC6Q8IVU3 AC020763.5-201ENST00000623298 430 ntBASIC7.09□□□□□ -1.27
HERC6Q8IVU3 SNORA17.5-201ENST00000630429 132 ntBASIC7.09□□□□□ -1.27
HERC6Q8IVU3 LINC02495-203ENST00000636704 242 ntBASIC7.09□□□□□ -1.27
HERC6Q8IVU3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.09□□□□□ -1.27
HERC6Q8IVU3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HERC6Q8IVU3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HERC6Q8IVU3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
HERC6Q8IVU3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HERC6Q8IVU3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HERC6Q8IVU3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
HERC6Q8IVU3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
HERC6Q8IVU3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
HERC6Q8IVU3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
HERC6Q8IVU3 HSPD1P9-201ENST00000420325 1636 ntBASIC7.09□□□□□ -1.28
HERC6Q8IVU3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 CASC19-243ENST00000641588 1546 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC010168.2-201ENST00000562691 5428 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 MIR199B-201ENST00000384849 110 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 NPM1P10-201ENST00000398310 865 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AL157702.1-201ENST00000398764 426 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 CDY17P-201ENST00000414121 1282 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 DUTP4-201ENST00000424782 475 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 EMC3-AS1-205ENST00000438698 534 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 NPM1P19-201ENST00000450070 712 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC090589.1-201ENST00000473109 362 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC074386.1-201ENST00000476560 767 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 RPL12P30-201ENST00000488389 499 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC025458.1-201ENST00000506046 166 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC006499.4-201ENST00000510947 694 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 IGKV3D-25-201ENST00000519599 235 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC026616.1-201ENST00000523157 525 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 OR4A13P-201ENST00000529316 942 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC079905.1-201ENST00000549280 475 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AL049874.4-201ENST00000557593 255 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 RN7SL208P-201ENST00000577964 296 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 MIR4701-201ENST00000583094 63 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC013731.1-201ENST00000604340 883 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC100767.2-201ENST00000604840 693 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC073389.3-201ENST00000609434 935 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 FO681491.1-202ENST00000623392 737 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HERC6Q8IVU3 RPL31P11-201ENST00000426558 1558 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 MTCO1P22-201ENST00000604619 1360 ntBASIC7.08□□□□□ -1.28
HERC6Q8IVU3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AL021877.2-201ENST00000624442 10684 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC015871.3-201ENST00000618835 2261 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 NPM1P25-201ENST00000429734 854 ntBASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.07□□□□□ -1.28
HERC6Q8IVU3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms