Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 RNU1-5P-201ENST00000362684 144 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 RNA5SP478-201ENST00000364657 115 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC006509.1-201ENST00000420788 634 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 SEC63P1-201ENST00000425785 1258 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 BX119904.3-201ENST00000428194 957 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC110056.1-201ENST00000525759 911 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 CHEK2P2-201ENST00000554701 672 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC003001.2-201ENST00000616294 831 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 KYNUP2-201ENST00000582280 1329 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC022417.1-201ENST00000624768 1303 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 AC011815.2-201ENST00000618230 2021 ntBASIC6.66□□□□□ -1.34
RFX6Q8HWS3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
RFX6Q8HWS3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AL669831.5-218ENST00000591702 1873 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 SNORD8-201ENST00000363915 110 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 SNORA40.4-201ENST00000390971 128 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC026310.1-201ENST00000396004 378 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 ZNF37CP-201ENST00000406795 241 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 RNA5SP155-201ENST00000411154 129 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 TPRKBP1-201ENST00000456243 481 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 RN7SL165P-201ENST00000477476 291 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 RPL5P33-201ENST00000487833 905 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC093870.1-201ENST00000506837 213 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC106800.3-201ENST00000511389 308 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC090616.1-201ENST00000583895 447 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC005972.3-201ENST00000606304 481 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.65□□□□□ -1.34
RFX6Q8HWS3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.65□□□□□ -1.34
RFX6Q8HWS3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 CCDC150P1-201ENST00000537123 2215 ntBASIC6.65□□□□□ -1.35
RFX6Q8HWS3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 BIN2P1-201ENST00000504996 1530 ntBASIC6.65□□□□□ -1.35
RFX6Q8HWS3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RFX6Q8HWS3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFX6Q8HWS3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFX6Q8HWS3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RFX6Q8HWS3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RFX6Q8HWS3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms