Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 THAP12P8-201ENST00000447914 2115 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC005725.1-201ENST00000577346 2607 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 RN7SKP237-201ENST00000364663 301 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 LDHAP5-201ENST00000394996 622 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AL360271.1-201ENST00000395679 510 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC013268.2-201ENST00000420753 337 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 CYCSP52-201ENST00000422857 310 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 GAPDHP20-201ENST00000444107 1007 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 RPL26P30-201ENST00000453533 435 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC236972.4-201ENST00000458091 963 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 RN7SL849P-201ENST00000485236 295 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 RPL21P42-201ENST00000488408 464 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 ENPP7P3-201ENST00000509123 241 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AL390198.2-201ENST00000510553 222 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 IGKV2D-38-201ENST00000518423 240 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 HNRNPCP1-201ENST00000556181 766 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 FAM30C-201ENST00000561158 410 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 WBP1LP11-201ENST00000586141 328 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC144521.1-201ENST00000607148 956 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 WBP1LP8-201ENST00000617401 327 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 AP001264.1-201ENST00000620602 703 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHFQ7M4L6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SHFQ7M4L6 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.84□□□□□ -1.47
SHFQ7M4L6 AC083837.1-201ENST00000565297 2994 ntBASIC5.84□□□□□ -1.48
SHFQ7M4L6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
SHFQ7M4L6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHFQ7M4L6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
SHFQ7M4L6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 MTND4P21-201ENST00000453886 1357 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 Y_RNA.62-201ENST00000362840 99 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 LCN1P2-201ENST00000372030 223 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 SNORA11D-201ENST00000408548 128 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 SNORA11E-201ENST00000408778 128 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 RN7SKP39-201ENST00000410773 322 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 CR848007.2-201ENST00000424918 787 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 MTCO1P57-201ENST00000432182 261 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 ZFAND6P1-201ENST00000434138 605 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC019185.3-201ENST00000438805 323 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 VN1R38P-201ENST00000450265 887 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 ST13P21-201ENST00000453250 1098 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 SCDP1-201ENST00000455244 1081 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 ATG10-AS1-201ENST00000504846 648 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC091965.3-201ENST00000506236 208 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 RPL7L1P7-201ENST00000509986 724 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms