Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL356289.3-201ENST00000640049 2669 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL139327.1-201ENST00000382988 348 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 VDAC2P1-201ENST00000399358 958 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 OR2W4P-201ENST00000406496 926 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 RPS7P9-201ENST00000414704 586 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC009480.2-201ENST00000422916 432 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 TNPO1P1-201ENST00000423641 1138 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 USP9YP18-201ENST00000425912 695 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AP003385.1-201ENST00000426387 893 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL034369.1-201ENST00000453808 477 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC008040.4-201ENST00000494834 768 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC004069.2-201ENST00000505438 1114 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 NMNAT1P5-201ENST00000559657 841 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC092960.1-201ENST00000604762 351 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC128687.1-201ENST00000605304 619 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 Y_RNA.812-201ENST00000610788 101 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 Y_RNA.784-201ENST00000613803 101 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 Y_RNA.787-201ENST00000616522 101 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 Y_RNA.780-201ENST00000617336 101 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 MIR6729-201ENST00000618194 65 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 Y_RNA.801-201ENST00000619005 101 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC002550.2-201ENST00000621246 394 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC073862.4-201ENST00000622982 854 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC012629.3-201ENST00000623397 328 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC073593.1-201ENST00000624500 411 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 MIR665-201ENST00000635949 72 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC011815.2-201ENST00000618230 2021 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC131971.1-201ENST00000332881 1482 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 ELF2P3-201ENST00000445099 1506 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 KDELC1P1-201ENST00000512118 1509 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 SGO1P2-201ENST00000429458 1589 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 AC087203.2-201ENST00000526502 1587 ntBASIC7.42□□□□□ -1.22
RSPO4Q2I0M5 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 AC078795.1-201ENST00000602342 3143 ntBASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 AC005538.2-201ENST00000623215 1864 ntBASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 RNU6-1009P-201ENST00000390996 107 ntBASIC7.41□□□□□ -1.22
RSPO4Q2I0M5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms