Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC097063.1-201ENST00000426714 1797 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL157831.2-201ENST00000564681 3095 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.9□□□□□ -1.62
HIST1H1AQ02539 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 RNA5SP321-201ENST00000362722 111 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 LDHAP5-201ENST00000394996 622 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 EEF1GP6-201ENST00000402309 905 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 RN7SKP161-201ENST00000411110 305 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 HMGA1P8-201ENST00000414130 321 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 PPIAP23-201ENST00000420099 497 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC009303.1-201ENST00000426307 352 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 ETF1P1-206ENST00000427296 984 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC003989.1-201ENST00000434569 565 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 RPS7P4-201ENST00000444127 582 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 RBMY2EP-202ENST00000456360 940 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 CCNJP2-201ENST00000457810 1163 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC090602.1-201ENST00000469695 252 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC022206.1-201ENST00000495947 347 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC008868.1-201ENST00000509786 737 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 TBCA-209ENST00000522370 435 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC007068.2-201ENST00000543168 395 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC091304.5-201ENST00000568969 158 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC024589.2-201ENST00000605642 1294 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AC012511.1-201ENST00000608140 449 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AP001264.1-201ENST00000620602 703 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 AL137058.3-201ENST00000624531 3099 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 SAMM50P1-201ENST00000455403 1399 ntBASIC4.9□□□□□ -1.63
HIST1H1AQ02539 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
HIST1H1AQ02539 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL355834.1-201ENST00000556602 3965 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC026523.2-201ENST00000625039 7739 ntBASIC4.89□□□□□ -1.63
HIST1H1AQ02539 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
HIST1H1AQ02539 AL117344.1-201ENST00000407196 616 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms