Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OR5G5P-204ENST00000627642 621 ntBASIC4.34□□□□□ -1.71
RPL39P62891 LINC02495-203ENST00000636704 242 ntBASIC4.34□□□□□ -1.71
RPL39P62891 SAMMSON-210ENST00000641260 1308 ntBASIC4.34□□□□□ -1.71
RPL39P62891 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 AC010132.4-201ENST00000569883 1368 ntBASIC4.34□□□□□ -1.71
RPL39P62891 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 RPL31P11-201ENST00000426558 1558 ntBASIC4.34□□□□□ -1.71
RPL39P62891 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC4.34□□□□□ -1.71
RPL39P62891 AP000641.1-201ENST00000531988 1639 ntBASIC4.34□□□□□ -1.71
RPL39P62891 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.34□□□□□ -1.71
RPL39P62891 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPL39P62891 CASC19-260ENST00000641828 2001 ntBASIC4.34□□□□□ -1.71
RPL39P62891 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RPL39P62891 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RPL39P62891 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
RPL39P62891 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.34□□□□□ -1.72
RPL39P62891 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RPL39P62891 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPL39P62891 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPL39P62891 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RPL39P62891 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RPL39P62891 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 AC004076.2-201ENST00000620532 3323 ntBASIC4.33□□□□□ -1.72
RPL39P62891 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 AL161756.3-201ENST00000641216 2071 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 OR5M2P-202ENST00000641241 4242 ntBASIC4.33□□□□□ -1.72
RPL39P62891 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 RNA5SP140-201ENST00000364524 92 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.33□□□□□ -1.72
RPL39P62891 FDPSP5-201ENST00000399474 1057 ntBASIC4.33□□□□□ -1.72
RPL39P62891 RNU2-5P-201ENST00000410533 180 ntBASIC4.33□□□□□ -1.72
RPL39P62891 RPL18AP14-201ENST00000417685 526 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 AC009303.1-201ENST00000426307 352 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 AC073410.1-201ENST00000435125 589 ntBASIC4.33□□□□□ -1.72
RPL39P62891 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 OSTCP1-201ENST00000455507 450 ntBASIC4.33□□□□□ -1.72
RPL39P62891 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 AC124945.1-201ENST00000485133 188 ntBASIC4.33□□□□□ -1.72
RPL39P62891 TRBV5-2-201ENST00000489095 273 ntBASIC4.33□□□□□ -1.72
RPL39P62891 RN7SL284P-201ENST00000498823 275 ntBASIC4.33□□□□□ -1.72
RPL39P62891 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 AC136777.2-201ENST00000522979 358 ntBASIC4.33□□□□□ -1.72
RPL39P62891 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 OR6M2P-201ENST00000529831 871 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AC009729.1-201ENST00000548873 1133 ntBASIC4.33□□□□□ -1.72
RPL39P62891 NF1P12-201ENST00000549593 583 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.33□□□□□ -1.72
RPL39P62891 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 AC026956.1-201ENST00000558741 396 ntBASIC4.33□□□□□ -1.72
RPL39P62891 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.33□□□□□ -1.72
RPL39P62891 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 MIR4312-201ENST00000579909 76 ntBASIC4.33□□□□□ -1.72
RPL39P62891 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.33□□□□□ -1.72
RPL39P62891 RAB28P4-201ENST00000622233 665 ntBASIC4.33□□□□□ -1.72
RPL39P62891 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 OR7A1P-202ENST00000641542 1158 ntBASIC4.33□□□□□ -1.72
RPL39P62891 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RPL39P62891 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RPL39P62891 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPL39P62891 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.32□□□□□ -1.72
RPL39P62891 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 AL359091.1-201ENST00000449048 1734 ntBASIC4.32□□□□□ -1.72
RPL39P62891 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.32□□□□□ -1.72
RPL39P62891 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RPL39P62891 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.32□□□□□ -1.72
RPL39P62891 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 SNORA43.1-201ENST00000364863 140 ntBASIC4.32□□□□□ -1.72
RPL39P62891 RNA5SP427-201ENST00000365323 119 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms