Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092681.3-201ENST00000609463 678 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AC010998.3-201ENST00000613871 631 ntBASIC5.23□□□□□ -1.57
LMO4P61968 FAM27E2-201ENST00000619668 403 ntBASIC5.23□□□□□ -1.57
LMO4P61968 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.23□□□□□ -1.57
LMO4P61968 AL354854.1-201ENST00000455940 1363 ntBASIC5.23□□□□□ -1.57
LMO4P61968 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMO4P61968 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LMO4P61968 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LMO4P61968 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LMO4P61968 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.23□□□□□ -1.57
LMO4P61968 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LMO4P61968 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.23□□□□□ -1.57
LMO4P61968 AL133243.2-201ENST00000610331 1621 ntBASIC5.23□□□□□ -1.57
LMO4P61968 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 AC009500.1-201ENST00000420684 583 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.22□□□□□ -1.57
LMO4P61968 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.22□□□□□ -1.57
LMO4P61968 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.22□□□□□ -1.57
LMO4P61968 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.22□□□□□ -1.57
LMO4P61968 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.22□□□□□ -1.57
LMO4P61968 MORF4-201ENST00000447135 971 ntBASIC5.22□□□□□ -1.57
LMO4P61968 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.22□□□□□ -1.57
LMO4P61968 PPIAP27-201ENST00000453800 265 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.22□□□□□ -1.57
LMO4P61968 LDHAP1-201ENST00000509421 992 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AC010343.2-201ENST00000510162 224 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.22□□□□□ -1.57
LMO4P61968 AC027369.2-201ENST00000528030 440 ntBASIC5.22□□□□□ -1.57
LMO4P61968 EIF4EP5-201ENST00000528228 640 ntBASIC5.22□□□□□ -1.57
LMO4P61968 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 AC007346.1-201ENST00000569208 867 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AP001823.1-201ENST00000604056 1003 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 AP003072.5-201ENST00000623872 773 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AP001962.1-201ENST00000624114 559 ntBASIC5.22□□□□□ -1.57
LMO4P61968 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 AC025809.2-201ENST00000625085 1802 ntBASIC5.22□□□□□ -1.57
LMO4P61968 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.22□□□□□ -1.57
LMO4P61968 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.22□□□□□ -1.57
LMO4P61968 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMO4P61968 AC018717.1-201ENST00000457712 1505 ntBASIC5.22□□□□□ -1.57
LMO4P61968 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LMO4P61968 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
LMO4P61968 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.22□□□□□ -1.57
LMO4P61968 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LMO4P61968 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.22□□□□□ -1.57
LMO4P61968 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LMO4P61968 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
LMO4P61968 AL359922.2-201ENST00000581788 3017 ntBASIC5.21□□□□□ -1.57
LMO4P61968 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LMO4P61968 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
LMO4P61968 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.21□□□□□ -1.57
LMO4P61968 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
LMO4P61968 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.21□□□□□ -1.58
LMO4P61968 AL359195.2-201ENST00000623657 4412 ntBASIC5.21□□□□□ -1.58
LMO4P61968 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 AL449283.1-201ENST00000602631 3403 ntBASIC5.21□□□□□ -1.58
LMO4P61968 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 FO082842.1-201ENST00000423552 1370 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LMO4P61968 RNA5SP350-201ENST00000363298 111 ntBASIC5.21□□□□□ -1.58
LMO4P61968 RNU1-24P-201ENST00000364285 165 ntBASIC5.21□□□□□ -1.58
LMO4P61968 LCN1P2-201ENST00000372030 223 ntBASIC5.21□□□□□ -1.58
LMO4P61968 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms