Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CLDN6P56747 RNA5SP242-201ENST00000364171 118 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.18□□□□□ -1.42
CLDN6P56747 RN7SKP278-201ENST00000410504 342 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 RN7SKP144-201ENST00000411108 279 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 CDY17P-201ENST00000414121 1282 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 MTND6P12-201ENST00000428247 522 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 RPL23AP19-201ENST00000436229 369 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 AL353662.1-201ENST00000439099 327 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 RPL31P15-201ENST00000449770 338 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 RN7SL104P-201ENST00000498686 293 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC106800.2-201ENST00000514009 1103 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 RN7SKP98-201ENST00000517070 156 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 AC060775.1-201ENST00000518241 520 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.18□□□□□ -1.42
CLDN6P56747 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.18□□□□□ -1.42
CLDN6P56747 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.18□□□□□ -1.42
CLDN6P56747 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.18□□□□□ -1.42
CLDN6P56747 RFPL4AP6-201ENST00000616792 846 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CLDN6P56747 MRPL57P1-201ENST00000621486 265 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 AC020763.5-201ENST00000623298 430 ntBASIC6.18□□□□□ -1.42
CLDN6P56747 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.18□□□□□ -1.42
CLDN6P56747 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLDN6P56747 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CLDN6P56747 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 AC110597.1-201ENST00000562669 3176 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 AL353743.3-201ENST00000442109 1468 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 AC087392.3-202ENST00000358446 1754 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CLDN6P56747 RNA5SP477-201ENST00000362639 119 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 SUGT1P2-201ENST00000379452 992 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.17□□□□□ -1.42
CLDN6P56747 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 DUTP4-201ENST00000424782 475 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.17□□□□□ -1.42
CLDN6P56747 AC007998.1-201ENST00000474156 672 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 AC122713.1-201ENST00000518368 1015 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 AC016144.1-201ENST00000548175 1087 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.17□□□□□ -1.42
CLDN6P56747 FAM27E2-201ENST00000619668 403 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 AL357153.4-201ENST00000620487 1016 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.17□□□□□ -1.42
CLDN6P56747 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 OR7E91P-202ENST00000642062 1198 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 RNF19BPY-201ENST00000458209 1550 ntBASIC6.17□□□□□ -1.42
CLDN6P56747 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLDN6P56747 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLDN6P56747 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 AC068733.2-201ENST00000605434 1418 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CLDN6P56747 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.16□□□□□ -1.42
CLDN6P56747 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 MTCO1P28-201ENST00000574177 1528 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
CLDN6P56747 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.16□□□□□ -1.42
CLDN6P56747 GTF3AP1-201ENST00000416942 1004 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.16□□□□□ -1.42
CLDN6P56747 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.16□□□□□ -1.42
CLDN6P56747 MED28P4-201ENST00000433137 572 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 CLUHP1-201ENST00000435012 1190 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 FABP5P2-201ENST00000439042 408 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 CRYGGP-201ENST00000443337 145 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.16□□□□□ -1.42
CLDN6P56747 RPL12P31-201ENST00000478433 450 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 AC022206.1-201ENST00000495947 347 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 2462.4 ms