Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH12P55289 PSMC1P6-201ENST00000477233 1319 ntBASIC6□□□□□ -1.45
CDH12P55289 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CDH12P55289 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 GLYATL1P1-201ENST00000528297 1607 ntBASIC6□□□□□ -1.45
CDH12P55289 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6□□□□□ -1.45
CDH12P55289 HSPD1P1-201ENST00000503199 1726 ntBASIC6□□□□□ -1.45
CDH12P55289 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
CDH12P55289 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDH12P55289 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CDH12P55289 RNA5SP321-201ENST00000362722 111 ntBASIC6□□□□□ -1.45
CDH12P55289 RNU6-819P-201ENST00000364116 107 ntBASIC6□□□□□ -1.45
CDH12P55289 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6□□□□□ -1.45
CDH12P55289 AL590635.1-201ENST00000406314 586 ntBASIC6□□□□□ -1.45
CDH12P55289 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 RN7SKP161-201ENST00000411110 305 ntBASIC6□□□□□ -1.45
CDH12P55289 AL139135.1-201ENST00000412675 209 ntBASIC6□□□□□ -1.45
CDH12P55289 MTND1P10-201ENST00000426108 832 ntBASIC6□□□□□ -1.45
CDH12P55289 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6□□□□□ -1.45
CDH12P55289 AL590762.3-201ENST00000436372 640 ntBASIC6□□□□□ -1.45
CDH12P55289 AC236972.4-201ENST00000458091 963 ntBASIC6□□□□□ -1.45
CDH12P55289 MARK2P8-201ENST00000476069 952 ntBASIC6□□□□□ -1.45
CDH12P55289 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6□□□□□ -1.45
CDH12P55289 AC114940.1-201ENST00000512162 1265 ntBASIC6□□□□□ -1.45
CDH12P55289 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6□□□□□ -1.45
CDH12P55289 RBMS2P1-201ENST00000525031 1226 ntBASIC6□□□□□ -1.45
CDH12P55289 EIF4A2P3-201ENST00000525903 1055 ntBASIC6□□□□□ -1.45
CDH12P55289 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6□□□□□ -1.45
CDH12P55289 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6□□□□□ -1.45
CDH12P55289 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6□□□□□ -1.45
CDH12P55289 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6□□□□□ -1.45
CDH12P55289 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6□□□□□ -1.45
CDH12P55289 AC020978.7-201ENST00000575953 1187 ntBASIC6□□□□□ -1.45
CDH12P55289 FCGR1CP-201ENST00000579737 1127 ntBASIC6□□□□□ -1.45
CDH12P55289 MIR4312-201ENST00000579909 76 ntBASIC6□□□□□ -1.45
CDH12P55289 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 AC020915.5-201ENST00000596836 964 ntBASIC6□□□□□ -1.45
CDH12P55289 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6□□□□□ -1.45
CDH12P55289 AC091133.5-201ENST00000603088 301 ntBASIC6□□□□□ -1.45
CDH12P55289 AC105148.1-201ENST00000604961 409 ntBASIC6□□□□□ -1.45
CDH12P55289 AL158211.2-201ENST00000607282 395 ntBASIC6□□□□□ -1.45
CDH12P55289 AC012511.1-201ENST00000608140 449 ntBASIC6□□□□□ -1.45
CDH12P55289 AC016542.1-201ENST00000608259 493 ntBASIC6□□□□□ -1.45
CDH12P55289 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 AC116165.3-201ENST00000614524 400 ntBASIC6□□□□□ -1.45
CDH12P55289 AC253576.2-201ENST00000618815 580 ntBASIC6□□□□□ -1.45
CDH12P55289 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6□□□□□ -1.45
CDH12P55289 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6□□□□□ -1.45
CDH12P55289 AC005225.5-201ENST00000623547 2225 ntBASIC6□□□□□ -1.45
CDH12P55289 MTND4P21-201ENST00000453886 1357 ntBASIC6□□□□□ -1.45
CDH12P55289 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH12P55289 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH12P55289 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 IMMTP1-201ENST00000435590 2219 ntBASIC5.99□□□□□ -1.45
CDH12P55289 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH12P55289 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.99□□□□□ -1.45
CDH12P55289 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDH12P55289 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDH12P55289 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH12P55289 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 AL136100.1-201ENST00000407696 330 ntBASIC5.99□□□□□ -1.45
CDH12P55289 MTND2P9-201ENST00000422293 931 ntBASIC5.99□□□□□ -1.45
CDH12P55289 NDUFA5P1-201ENST00000433858 341 ntBASIC5.99□□□□□ -1.45
CDH12P55289 ZFAND6P1-201ENST00000434138 605 ntBASIC5.99□□□□□ -1.45
CDH12P55289 AC003989.1-201ENST00000434569 565 ntBASIC5.99□□□□□ -1.45
CDH12P55289 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 H3F3BP1-201ENST00000440551 403 ntBASIC5.99□□□□□ -1.45
CDH12P55289 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH12P55289 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 TVP23CP1-201ENST00000450317 639 ntBASIC5.99□□□□□ -1.45
CDH12P55289 RBMY2EP-202ENST00000456360 940 ntBASIC5.99□□□□□ -1.45
CDH12P55289 SNX18P26-201ENST00000458433 740 ntBASIC5.99□□□□□ -1.45
CDH12P55289 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH12P55289 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH12P55289 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH12P55289 AC112206.4-201ENST00000515142 405 ntBASIC5.99□□□□□ -1.45
CDH12P55289 AC093878.1-201ENST00000515630 432 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms