Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.82□□□□□ -1.48
SHC1P29353 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
SHC1P29353 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.82□□□□□ -1.48
SHC1P29353 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.82□□□□□ -1.48
SHC1P29353 AP001000.1-201ENST00000526843 742 ntBASIC5.82□□□□□ -1.48
SHC1P29353 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.82□□□□□ -1.48
SHC1P29353 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.82□□□□□ -1.48
SHC1P29353 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.82□□□□□ -1.48
SHC1P29353 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.82□□□□□ -1.48
SHC1P29353 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.82□□□□□ -1.48
SHC1P29353 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.82□□□□□ -1.48
SHC1P29353 WBP1LP12-201ENST00000604449 331 ntBASIC5.82□□□□□ -1.48
SHC1P29353 MIR6085-201ENST00000618314 110 ntBASIC5.82□□□□□ -1.48
SHC1P29353 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.82□□□□□ -1.48
SHC1P29353 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHC1P29353 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.82□□□□□ -1.48
SHC1P29353 LINC01616-201ENST00000561816 2280 ntBASIC5.82□□□□□ -1.48
SHC1P29353 AC093297.3-201ENST00000607056 2517 ntBASIC5.82□□□□□ -1.48
SHC1P29353 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHC1P29353 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.82□□□□□ -1.48
SHC1P29353 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.82□□□□□ -1.48
SHC1P29353 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHC1P29353 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHC1P29353 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHC1P29353 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 AC011815.2-201ENST00000618230 2021 ntBASIC5.81□□□□□ -1.48
SHC1P29353 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.81□□□□□ -1.48
SHC1P29353 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 RN7SKP237-201ENST00000364663 301 ntBASIC5.81□□□□□ -1.48
SHC1P29353 RNA5SP77-201ENST00000365394 120 ntBASIC5.81□□□□□ -1.48
SHC1P29353 LCN1P2-201ENST00000372030 223 ntBASIC5.81□□□□□ -1.48
SHC1P29353 AL391419.1-201ENST00000398901 1275 ntBASIC5.81□□□□□ -1.48
SHC1P29353 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.81□□□□□ -1.48
SHC1P29353 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.81□□□□□ -1.48
SHC1P29353 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.81□□□□□ -1.48
SHC1P29353 AC003989.1-201ENST00000434569 565 ntBASIC5.81□□□□□ -1.48
SHC1P29353 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.81□□□□□ -1.48
SHC1P29353 RPS18P1-201ENST00000447840 458 ntBASIC5.81□□□□□ -1.48
SHC1P29353 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.81□□□□□ -1.48
SHC1P29353 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 CCNJP2-201ENST00000457810 1163 ntBASIC5.81□□□□□ -1.48
SHC1P29353 RN7SL39P-201ENST00000462264 297 ntBASIC5.81□□□□□ -1.48
SHC1P29353 RPS7P10-201ENST00000464254 603 ntBASIC5.81□□□□□ -1.48
SHC1P29353 AC044810.1-201ENST00000480271 711 ntBASIC5.81□□□□□ -1.48
SHC1P29353 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.81□□□□□ -1.48
SHC1P29353 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 TDGP1-201ENST00000543961 1229 ntBASIC5.81□□□□□ -1.48
SHC1P29353 AC073916.1-201ENST00000545095 130 ntBASIC5.81□□□□□ -1.48
SHC1P29353 RPL3P13-201ENST00000550415 216 ntBASIC5.81□□□□□ -1.48
SHC1P29353 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.81□□□□□ -1.48
SHC1P29353 AL121579.2-201ENST00000555466 590 ntBASIC5.81□□□□□ -1.48
SHC1P29353 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 NDUFB9P1-201ENST00000604683 510 ntBASIC5.81□□□□□ -1.48
SHC1P29353 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.81□□□□□ -1.48
SHC1P29353 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.81□□□□□ -1.48
SHC1P29353 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.81□□□□□ -1.48
SHC1P29353 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHC1P29353 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.8□□□□□ -1.48
SHC1P29353 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHC1P29353 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.8□□□□□ -1.48
SHC1P29353 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHC1P29353 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms