Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.74□□□□□ -1.17
NFKB1P19838 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.74□□□□□ -1.17
NFKB1P19838 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.74□□□□□ -1.17
NFKB1P19838 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.74□□□□□ -1.17
NFKB1P19838 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.74□□□□□ -1.17
NFKB1P19838 AL035417.2-201ENST00000603887 796 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 AL109918.2-201ENST00000605188 279 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 AL451074.6-201ENST00000608512 729 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 AC004067.1-201ENST00000608733 700 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 Z99129.1-201ENST00000612510 255 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 AC010678.1-201ENST00000614118 713 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 AC025162.2-201ENST00000619602 560 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.74□□□□□ -1.17
NFKB1P19838 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.74□□□□□ -1.17
NFKB1P19838 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.74□□□□□ -1.17
NFKB1P19838 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.74□□□□□ -1.17
NFKB1P19838 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NFKB1P19838 COL6A4P1-202ENST00000487147 4317 ntBASIC7.74□□□□□ -1.17
NFKB1P19838 AC010886.1-201ENST00000437380 2869 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NFKB1P19838 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NFKB1P19838 MIR614-201ENST00000385082 90 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 KRT18P52-201ENST00000404956 846 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 RAC1P4-201ENST00000419413 579 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC092066.1-201ENST00000425131 317 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 GYG1P2-201ENST00000426437 1006 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC097721.1-201ENST00000427150 1253 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 ANKRD54P1-201ENST00000433115 471 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AL606752.1-201ENST00000435442 666 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 ELOCP10-201ENST00000440624 327 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.73□□□□□ -1.17
NFKB1P19838 FO393419.1-201ENST00000443746 355 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 RPL4P2-201ENST00000447259 1282 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 FGF7P6-202ENST00000451282 293 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 RN7SL55P-201ENST00000464534 297 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.73□□□□□ -1.17
NFKB1P19838 AC005550.2-201ENST00000476382 318 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 PRDX4P1-201ENST00000507189 574 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 RNU6-405P-201ENST00000516637 110 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.73□□□□□ -1.17
NFKB1P19838 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 MIR4793-201ENST00000577502 87 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 SNORA59B-202ENST00000578183 701 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 RPL35AP25-201ENST00000584631 330 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 AL137190.1-201ENST00000603288 282 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 ELOCP34-201ENST00000604436 327 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC128687.1-201ENST00000605304 619 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC090186.1-201ENST00000605991 572 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NFKB1P19838 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.73□□□□□ -1.17
NFKB1P19838 FAM74A6-203ENST00000615956 481 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 MIR6737-201ENST00000617385 70 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC008443.7-201ENST00000622195 246 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 AC099667.1-201ENST00000624222 469 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 SAMMSON-209ENST00000641222 1100 ntBASIC7.73□□□□□ -1.17
NFKB1P19838 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.73□□□□□ -1.17
NFKB1P19838 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NFKB1P19838 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NFKB1P19838 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.72□□□□□ -1.17
NFKB1P19838 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms