Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 NMNAT1P3-201ENST00000457517 888 ntBASIC8.04□□□□□ -1.12
BMP3P12645 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 NACAP5-201ENST00000509863 636 ntBASIC8.04□□□□□ -1.12
BMP3P12645 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.04□□□□□ -1.12
BMP3P12645 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC8.04□□□□□ -1.12
BMP3P12645 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC8.04□□□□□ -1.12
BMP3P12645 RNA5SP278-201ENST00000517055 102 ntBASIC8.04□□□□□ -1.12
BMP3P12645 SNORA76.2-201ENST00000517095 137 ntBASIC8.04□□□□□ -1.12
BMP3P12645 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.04□□□□□ -1.12
BMP3P12645 PTTG3P-201ENST00000521862 606 ntBASIC8.04□□□□□ -1.12
BMP3P12645 AC010306.1-201ENST00000523223 1117 ntBASIC8.04□□□□□ -1.12
BMP3P12645 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.04□□□□□ -1.12
BMP3P12645 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC8.04□□□□□ -1.12
BMP3P12645 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC8.04□□□□□ -1.12
BMP3P12645 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 AC024267.2-201ENST00000582737 417 ntBASIC8.04□□□□□ -1.12
BMP3P12645 AC010327.2-201ENST00000587647 488 ntBASIC8.04□□□□□ -1.12
BMP3P12645 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 AC016727.1-205ENST00000605437 569 ntBASIC8.04□□□□□ -1.12
BMP3P12645 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
BMP3P12645 AL137246.2-201ENST00000613439 662 ntBASIC8.04□□□□□ -1.12
BMP3P12645 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 AC211486.4-201ENST00000621495 113 ntBASIC8.04□□□□□ -1.12
BMP3P12645 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 CASC19-232ENST00000641480 1244 ntBASIC8.04□□□□□ -1.12
BMP3P12645 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 AL512329.1-201ENST00000404600 1592 ntBASIC8.04□□□□□ -1.12
BMP3P12645 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
BMP3P12645 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
BMP3P12645 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
BMP3P12645 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
BMP3P12645 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
BMP3P12645 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
BMP3P12645 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
BMP3P12645 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.03□□□□□ -1.12
BMP3P12645 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.03□□□□□ -1.12
BMP3P12645 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 DLEU2L-201ENST00000371086 3555 ntBASIC8.03□□□□□ -1.12
BMP3P12645 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.03□□□□□ -1.12
BMP3P12645 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.03□□□□□ -1.12
BMP3P12645 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.03□□□□□ -1.12
BMP3P12645 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.03□□□□□ -1.12
BMP3P12645 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 NPM1P37-201ENST00000403105 874 ntBASIC8.03□□□□□ -1.12
BMP3P12645 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC8.03□□□□□ -1.12
BMP3P12645 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC8.03□□□□□ -1.12
BMP3P12645 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 AL139415.1-201ENST00000424862 352 ntBASIC8.03□□□□□ -1.12
BMP3P12645 DNAJA1P1-201ENST00000425106 1187 ntBASIC8.03□□□□□ -1.12
BMP3P12645 DPPA2P1-201ENST00000428060 556 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AL390023.1-201ENST00000428836 262 ntBASIC8.03□□□□□ -1.12
BMP3P12645 USP9YP24-201ENST00000434374 697 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC8.03□□□□□ -1.12
BMP3P12645 USP9YP17-201ENST00000444617 696 ntBASIC8.03□□□□□ -1.12
BMP3P12645 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC8.03□□□□□ -1.12
BMP3P12645 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC8.03□□□□□ -1.12
BMP3P12645 AP003385.3-201ENST00000472498 287 ntBASIC8.03□□□□□ -1.12
BMP3P12645 RN7SL836P-201ENST00000476140 296 ntBASIC8.03□□□□□ -1.12
BMP3P12645 RN7SL70P-201ENST00000478322 302 ntBASIC8.03□□□□□ -1.12
BMP3P12645 RPS7P11-201ENST00000484240 586 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.03□□□□□ -1.12
BMP3P12645 AC096743.1-201ENST00000485172 319 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AC117532.1-201ENST00000514638 323 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.03□□□□□ -1.12
BMP3P12645 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.03□□□□□ -1.12
BMP3P12645 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC8.03□□□□□ -1.12
BMP3P12645 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.03□□□□□ -1.12
BMP3P12645 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.03□□□□□ -1.12
BMP3P12645 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.03□□□□□ -1.12
BMP3P12645 OR4C49P-201ENST00000563891 900 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.03□□□□□ -1.12
BMP3P12645 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.03□□□□□ -1.12
BMP3P12645 AC107952.2-201ENST00000606048 486 ntBASIC8.03□□□□□ -1.12
BMP3P12645 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC8.03□□□□□ -1.12
BMP3P12645 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.03□□□□□ -1.12
BMP3P12645 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
BMP3P12645 CXADRP3-202ENST00000617265 1100 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AC026367.3-201ENST00000619032 590 ntBASIC8.03□□□□□ -1.12
BMP3P12645 AL596275.2-203ENST00000641951 371 ntBASIC8.03□□□□□ -1.12
BMP3P12645 OR8A1-204ENST00000642111 1145 ntBASIC8.03□□□□□ -1.12
BMP3P12645 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
BMP3P12645 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms