Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MROH3P-201ENST00000435735 2676 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
HMGB1P09429 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 TRIM53CP-201ENST00000531490 1354 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 RPS26P13-201ENST00000419030 330 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.03□□□□□ -1.12
HMGB1P09429 RPS10P21-201ENST00000430654 475 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 CYCSP11-201ENST00000436426 315 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.03□□□□□ -1.12
HMGB1P09429 AC022431.1-201ENST00000450941 438 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 RPL7AP71-201ENST00000451120 739 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 RN7SL216P-201ENST00000471607 298 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 RN7SL561P-201ENST00000488553 281 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 RPL10P7-201ENST00000495649 625 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
HMGB1P09429 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 AC096754.1-201ENST00000508904 818 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AC134698.1-201ENST00000511619 643 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AC017007.1-201ENST00000511960 415 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.03□□□□□ -1.12
HMGB1P09429 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 PPIAP6-201ENST00000557078 499 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 RN7SL426P-201ENST00000579106 295 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 RN7SL270P-201ENST00000579643 281 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.03□□□□□ -1.12
HMGB1P09429 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.03□□□□□ -1.12
HMGB1P09429 RPS27AP19-201ENST00000597285 458 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AL353807.4-201ENST00000604995 257 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AC023813.4-201ENST00000607580 580 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC8.03□□□□□ -1.12
HMGB1P09429 AC145207.9-201ENST00000623802 325 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.03□□□□□ -1.12
HMGB1P09429 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
HMGB1P09429 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 AC133552.1-201ENST00000569988 4007 ntBASIC8.03□□□□□ -1.12
HMGB1P09429 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.03□□□□□ -1.12
HMGB1P09429 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.03□□□□□ -1.12
HMGB1P09429 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.03□□□□□ -1.12
HMGB1P09429 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.12
HMGB1P09429 KARSP1-201ENST00000451871 1752 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HMGB1P09429 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HMGB1P09429 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HMGB1P09429 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
HMGB1P09429 RN7SKP189-201ENST00000365042 330 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HMGB1P09429 AL360271.1-201ENST00000395679 510 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 EEF1GP6-201ENST00000402309 905 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 PPIAP23-201ENST00000420099 497 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 PAICSP2-201ENST00000429118 1150 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 NDUFA5P10-201ENST00000432147 357 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 PMS2P9-201ENST00000441237 515 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.02□□□□□ -1.13
HMGB1P09429 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.02□□□□□ -1.13
HMGB1P09429 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.02□□□□□ -1.13
HMGB1P09429 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.02□□□□□ -1.13
HMGB1P09429 RN7SL390P-201ENST00000470634 284 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 RPSAP37-201ENST00000470913 821 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 AC096741.1-201ENST00000472250 846 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 RN7SL868P-201ENST00000485915 303 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 AC063943.2-201ENST00000495697 534 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.02□□□□□ -1.13
HMGB1P09429 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.02□□□□□ -1.13
HMGB1P09429 AL590032.1-201ENST00000604920 252 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 U1.31-201ENST00000620022 160 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC8.02□□□□□ -1.13
HMGB1P09429 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.02□□□□□ -1.13
HMGB1P09429 RPL23AP61-201ENST00000623642 466 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC8.02□□□□□ -1.13
HMGB1P09429 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.02□□□□□ -1.13
HMGB1P09429 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.02□□□□□ -1.13
HMGB1P09429 AC093775.1-201ENST00000624154 1868 ntBASIC8.02□□□□□ -1.13
HMGB1P09429 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms