Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 AC244034.2-201ENST00000562504 509 ntBASIC6.34□□□□□ -1.39
HLA-DQB2P05538 AC138207.8-204ENST00000579588 527 ntBASIC6.34□□□□□ -1.39
HLA-DQB2P05538 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 NPIPB1P-202ENST00000588786 828 ntBASIC6.34□□□□□ -1.39
HLA-DQB2P05538 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 AL137246.2-201ENST00000613439 662 ntBASIC6.34□□□□□ -1.39
HLA-DQB2P05538 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 OR7A1P-202ENST00000641542 1158 ntBASIC6.34□□□□□ -1.39
HLA-DQB2P05538 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 AC096921.2-201ENST00000561507 1916 ntBASIC6.34□□□□□ -1.39
HLA-DQB2P05538 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-DQB2P05538 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
HLA-DQB2P05538 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HLA-DQB2P05538 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.34□□□□□ -1.4
HLA-DQB2P05538 AKAP17BP-201ENST00000431706 2719 ntBASIC6.34□□□□□ -1.4
HLA-DQB2P05538 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-DQB2P05538 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC092724.1-201ENST00000624623 3397 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 PPIAP10-201ENST00000438675 458 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC073594.1-201ENST00000462065 364 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 RN7SL552P-201ENST00000462094 276 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 SNX18P24-201ENST00000505249 671 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 Y_RNA.710-201ENST00000516975 110 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AP003033.2-201ENST00000528901 805 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC011500.1-201ENST00000601963 469 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC003992.1-201ENST00000635364 557 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 SHQ1P1-201ENST00000437111 1544 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC018717.1-201ENST00000457712 1505 ntBASIC6.33□□□□□ -1.4
HLA-DQB2P05538 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DQB2P05538 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 EIF3EP1-201ENST00000433978 1316 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 RN7SKP250-201ENST00000363924 321 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 SNORA70H-201ENST00000383910 135 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 SNORA70J-201ENST00000384182 135 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 MIR188-201ENST00000385034 86 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AC121334.1-201ENST00000396414 802 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 GAPDHP23-201ENST00000444823 993 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 HIGD1AP16-201ENST00000450986 258 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 RN7SL568P-201ENST00000493069 298 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AC090115.2-201ENST00000548060 883 ntBASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AC079414.3-201ENST00000612986 1090 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms