Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 AC119674.1-202ENST00000641333 1860 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 OR52B3P-201ENST00000314715 928 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 TMSB4XP2-201ENST00000335179 210 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 RNFT1P3-201ENST00000340898 1052 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 CYP4F30P-202ENST00000420048 405 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 BRWD1P3-201ENST00000428816 390 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.51□□□□□ -1.21
COL1A1P02452 AL161636.2-201ENST00000445179 927 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.51□□□□□ -1.21
COL1A1P02452 MORF4-201ENST00000447135 971 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 NPM1P19-201ENST00000450070 712 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.51□□□□□ -1.21
COL1A1P02452 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 AC090958.1-201ENST00000511122 351 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 AC114781.3-201ENST00000512083 142 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.51□□□□□ -1.21
COL1A1P02452 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.51□□□□□ -1.21
COL1A1P02452 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.51□□□□□ -1.21
COL1A1P02452 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.51□□□□□ -1.21
COL1A1P02452 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 AC073488.3-201ENST00000631611 778 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.51□□□□□ -1.21
COL1A1P02452 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.51□□□□□ -1.21
COL1A1P02452 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 RBMY1HP-201ENST00000382759 1389 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 OR13C1P-202ENST00000641378 2919 ntBASIC7.51□□□□□ -1.21
COL1A1P02452 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
COL1A1P02452 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.51□□□□□ -1.21
COL1A1P02452 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
COL1A1P02452 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL1A1P02452 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
COL1A1P02452 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL1A1P02452 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL1A1P02452 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL1A1P02452 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL1A1P02452 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.5□□□□□ -1.21
COL1A1P02452 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.5□□□□□ -1.21
COL1A1P02452 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.5□□□□□ -1.21
COL1A1P02452 RPS27AP3-201ENST00000453803 454 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AC068522.1-201ENST00000482895 345 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.5□□□□□ -1.21
COL1A1P02452 RPA2P3-201ENST00000533268 770 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.5□□□□□ -1.21
COL1A1P02452 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.5□□□□□ -1.21
COL1A1P02452 AP005119.1-201ENST00000580956 292 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.5□□□□□ -1.21
COL1A1P02452 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.5□□□□□ -1.21
COL1A1P02452 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.5□□□□□ -1.21
COL1A1P02452 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL1A1P02452 AC108673.3-201ENST00000609183 335 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AP005431.1-201ENST00000618479 319 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AL136228.1-201ENST00000622221 319 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
COL1A1P02452 AP002370.1-201ENST00000528055 1602 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AC105235.1-201ENST00000623208 1816 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 AC105749.1-201ENST00000631338 2008 ntBASIC7.5□□□□□ -1.21
COL1A1P02452 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.5□□□□□ -1.21
COL1A1P02452 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
COL1A1P02452 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL1A1P02452 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 RN7SKP286-201ENST00000410894 299 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 UBE2V1P14-201ENST00000415815 558 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 VN1R38P-201ENST00000450265 887 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC027308.1-201ENST00000517993 110 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.49□□□□□ -1.21
COL1A1P02452 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 NPM1P45-201ENST00000583151 559 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms