Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC024558.1-201ENST00000505008 528 ntBASIC10.73□□□□□ -0.69
CUX2O14529 AC147055.3-201ENST00000510547 851 ntBASIC10.73□□□□□ -0.69
CUX2O14529 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.73□□□□□ -0.69
CUX2O14529 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CUX2O14529 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC10.73□□□□□ -0.69
CUX2O14529 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC10.73□□□□□ -0.69
CUX2O14529 BUB1P1-201ENST00000603541 607 ntBASIC10.73□□□□□ -0.69
CUX2O14529 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CUX2O14529 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CUX2O14529 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC10.72□□□□□ -0.69
CUX2O14529 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
CUX2O14529 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 AL109941.1-201ENST00000401925 229 ntBASIC10.72□□□□□ -0.69
CUX2O14529 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC10.72□□□□□ -0.69
CUX2O14529 RPL23AP68-201ENST00000480924 445 ntBASIC10.72□□□□□ -0.69
CUX2O14529 RPSAP50-201ENST00000481955 852 ntBASIC10.72□□□□□ -0.69
CUX2O14529 AC026826.1-201ENST00000493002 361 ntBASIC10.72□□□□□ -0.69
CUX2O14529 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC10.72□□□□□ -0.69
CUX2O14529 AC010998.3-201ENST00000613871 631 ntBASIC10.72□□□□□ -0.69
CUX2O14529 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC10.72□□□□□ -0.69
CUX2O14529 FTO-215ENST00000636491 1676 ntTSL 5 BASIC10.72□□□□□ -0.69
CUX2O14529 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC10.72□□□□□ -0.69
CUX2O14529 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC10.72□□□□□ -0.69
CUX2O14529 ITPK1-AS1-201ENST00000553639 4701 ntBASIC10.72□□□□□ -0.69
CUX2O14529 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CUX2O14529 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CUX2O14529 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CUX2O14529 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC10.71□□□□□ -0.69
CUX2O14529 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CUX2O14529 AL161901.1-201ENST00000624954 3425 ntBASIC10.71□□□□□ -0.69
CUX2O14529 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10.71□□□□□ -0.69
CUX2O14529 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC10.71□□□□□ -0.69
CUX2O14529 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC10.71□□□□□ -0.69
CUX2O14529 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC10.71□□□□□ -0.69
CUX2O14529 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC10.71□□□□□ -0.69
CUX2O14529 AL356801.1-201ENST00000559320 294 ntBASIC10.71□□□□□ -0.69
CUX2O14529 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC10.71□□□□□ -0.69
CUX2O14529 AC010333.3-201ENST00000615100 402 ntBASIC10.71□□□□□ -0.69
CUX2O14529 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CUX2O14529 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CUX2O14529 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC10.71□□□□□ -0.7
CUX2O14529 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.7
CUX2O14529 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
CUX2O14529 MTCO1P25-201ENST00000414449 1799 ntBASIC10.7□□□□□ -0.7
CUX2O14529 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 AC092111.1-201ENST00000618256 3358 ntBASIC10.7□□□□□ -0.7
CUX2O14529 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CUX2O14529 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 RNA5SP183-201ENST00000362452 119 ntBASIC10.7□□□□□ -0.7
CUX2O14529 AL589647.1-201ENST00000402485 466 ntBASIC10.7□□□□□ -0.7
CUX2O14529 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC10.7□□□□□ -0.7
CUX2O14529 DEFA11P-201ENST00000446470 261 ntBASIC10.7□□□□□ -0.7
CUX2O14529 FTLP8-201ENST00000446770 267 ntBASIC10.7□□□□□ -0.7
CUX2O14529 SUMO2P10-201ENST00000452006 288 ntBASIC10.7□□□□□ -0.7
CUX2O14529 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CUX2O14529 OR9L1P-201ENST00000529493 933 ntBASIC10.7□□□□□ -0.7
CUX2O14529 AC004825.1-201ENST00000555068 586 ntBASIC10.7□□□□□ -0.7
CUX2O14529 MIR4776-2-201ENST00000580204 80 ntBASIC10.7□□□□□ -0.7
CUX2O14529 AC010435.1-201ENST00000623353 1177 ntBASIC10.7□□□□□ -0.7
CUX2O14529 OXSM-209ENST00000626005 309 ntTSL 3 BASIC10.7□□□□□ -0.7
CUX2O14529 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CUX2O14529 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC10.7□□□□□ -0.7
CUX2O14529 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CUX2O14529 AP005139.1-201ENST00000580702 1647 ntBASIC10.7□□□□□ -0.7
CUX2O14529 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CUX2O14529 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CUX2O14529 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
CUX2O14529 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC10.69□□□□□ -0.7
CUX2O14529 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC10.69□□□□□ -0.7
CUX2O14529 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CUX2O14529 CYCSP51-201ENST00000443545 318 ntBASIC10.69□□□□□ -0.7
CUX2O14529 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC10.69□□□□□ -0.7
CUX2O14529 STRADBP1-201ENST00000478954 1281 ntBASIC10.69□□□□□ -0.7
CUX2O14529 RN7SL714P-201ENST00000487050 298 ntBASIC10.69□□□□□ -0.7
CUX2O14529 CDC42P3-201ENST00000518493 633 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms