Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC117525.1-201ENST00000515228 503 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC023080.1-201ENST00000551663 931 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC089984.3-201ENST00000552838 363 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC090774.2-201ENST00000584708 322 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 U1.41-201ENST00000617626 165 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 AL590410.1-201ENST00000617925 333 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC074141.1-201ENST00000588129 2995 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC073365.1-203ENST00000641055 1992 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.2□□□□□ -1.58
SRRM4A7MD48 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRRM4A7MD48 AC067942.1-201ENST00000488045 1493 ntBASIC5.2□□□□□ -1.58
SRRM4A7MD48 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 SAGE3P-201ENST00000619800 1635 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC011455.2-201ENST00000599320 3336 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 RNA5SP308-201ENST00000362532 115 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 MRPS6P2-201ENST00000381143 370 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC026310.1-201ENST00000396004 378 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 NPM1P10-201ENST00000398310 865 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 ZNF37CP-201ENST00000406795 241 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AL139039.2-201ENST00000407436 479 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 CDC42P6-201ENST00000421246 576 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 SLAMF6P1-201ENST00000451067 602 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AKR1D1P1-201ENST00000457236 936 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 SLC25A51P2-201ENST00000535708 889 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC114477.1-201ENST00000605097 605 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC019257.2-201ENST00000605539 497 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AL445649.1-201ENST00000615941 691 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC018659.2-201ENST00000624690 715 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC004023.1-201ENST00000561473 1744 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms