Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 AL162377.1-201ENST00000618844 1793 ntBASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HRH3Q9Y5N1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 AC023632.3-201ENST00000521633 145 ntBASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 AL031963.3-201ENST00000606441 850 ntBASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.25■□□□□ 0.51
HRH3Q9Y5N1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HRH3Q9Y5N1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.23■□□□□ 0.51
HRH3Q9Y5N1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms