Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.3■■□□□ 1
SSX2IPQ9Y2D8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.3■■□□□ 1
SSX2IPQ9Y2D8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SSX2IPQ9Y2D8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
SSX2IPQ9Y2D8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SSX2IPQ9Y2D8 KRT8P20-201ENST00000423953 1409 ntBASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.29■■□□□ 1
SSX2IPQ9Y2D8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 AC124283.5-201ENST00000624661 1809 ntBASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 AL353708.3-201ENST00000610272 989 ntBASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSX2IPQ9Y2D8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 MMP23A-201ENST00000234610 1017 ntBASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 TSPY15P-201ENST00000457163 923 ntBASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 AP002982.1-201ENST00000492365 877 ntBASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 KRT18P21-201ENST00000515767 1272 ntBASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 AL031963.3-201ENST00000606441 850 ntBASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 AC012306.2-201ENST00000609350 630 ntBASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.27■■□□□ 1
SSX2IPQ9Y2D8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SSX2IPQ9Y2D8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 FAM197Y1-201ENST00000421178 764 ntBASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSX2IPQ9Y2D8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 AC010331.1-201ENST00000611423 582 ntBASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SSX2IPQ9Y2D8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms