Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 KRT8P20-201ENST00000423953 1409 ntBASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00474Q9P2X8 AC087289.5-201ENST00000586076 3175 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 GABARAPL3-202ENST00000624044 1851 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 AC069152.1-201ENST00000438030 544 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 AC091874.3-201ENST00000512672 1195 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 AC142086.2-201ENST00000569753 217 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 AC020907.5-201ENST00000624372 1936 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 KRT17P1-201ENST00000399211 1546 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 KRT16P6-202ENST00000425692 1426 ntBASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00474Q9P2X8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 DUSP5P2-201ENST00000426873 1033 ntBASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 GUSBP6-202ENST00000438529 1198 ntBASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00474Q9P2X8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC00474Q9P2X8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms