Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLGN3Q9NZ94 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.39■□□□□ 0.7
NLGN3Q9NZ94 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NLGN3Q9NZ94 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 KSR1P1-201ENST00000446298 240 ntBASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 REXO1L10P-201ENST00000615707 1290 ntBASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 KRT8P17-201ENST00000453110 1448 ntBASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLGN3Q9NZ94 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 NIFKP9-201ENST00000419265 221 ntBASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.38■□□□□ 0.69
NLGN3Q9NZ94 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
NLGN3Q9NZ94 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AL121603.2-201ENST00000557373 2117 ntBASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AC145285.6-201ENST00000604632 637 ntBASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 CR392000.1-201ENST00000624770 1228 ntBASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NLGN3Q9NZ94 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 AC079598.2-202ENST00000546624 1451 ntBASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 KRT16P1-201ENST00000399124 1418 ntBASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 TMPOP1-202ENST00000424642 1267 ntBASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms