Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 AC005829.2-201ENST00000571422 1056 ntBASIC18.34■□□□□ 0.53
UBQLN3Q9H347 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN3Q9H347 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 PRORSD1P-201ENST00000295112 541 ntBASIC18.33■□□□□ 0.52
UBQLN3Q9H347 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 KRT18P29-201ENST00000397031 1267 ntBASIC18.33■□□□□ 0.52
UBQLN3Q9H347 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 SOX15-203ENST00000570788 1093 ntBASIC18.33■□□□□ 0.52
UBQLN3Q9H347 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 AC006058.3-201ENST00000606217 1069 ntBASIC18.33■□□□□ 0.52
UBQLN3Q9H347 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.33■□□□□ 0.52
UBQLN3Q9H347 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN3Q9H347 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 AC128676.1-201ENST00000454392 318 ntBASIC18.31■□□□□ 0.52
UBQLN3Q9H347 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN3Q9H347 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms