Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 AL158047.1-201ENST00000445918 881 ntBASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 AC008403.3-201ENST00000598924 454 ntBASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 AC006557.6-201ENST00000623071 864 ntBASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCGF1Q9BSM1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.56■□□□□ 0.24
PCGF1Q9BSM1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 AC020907.5-201ENST00000624372 1936 ntBASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCGF1Q9BSM1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 AC142381.4-202ENST00000563973 229 ntBASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 AC005829.2-201ENST00000571422 1056 ntBASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 AC066615.1-201ENST00000640911 628 ntBASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 AC073314.1-201ENST00000568729 2216 ntBASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCGF1Q9BSM1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCGF1Q9BSM1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms