Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPG11Q96JI7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.84■□□□□ 0.29
SPG11Q96JI7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SPG11Q96JI7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.83■□□□□ 0.28
SPG11Q96JI7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPG11Q96JI7 AC091390.4-202ENST00000476426 537 ntBASIC16.83■□□□□ 0.28
SPG11Q96JI7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.83■□□□□ 0.28
SPG11Q96JI7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPG11Q96JI7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPG11Q96JI7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SPG11Q96JI7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.83■□□□□ 0.28
SPG11Q96JI7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.83■□□□□ 0.28
SPG11Q96JI7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPG11Q96JI7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPG11Q96JI7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 C1QL1P1-201ENST00000568105 661 ntBASIC16.82■□□□□ 0.28
SPG11Q96JI7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 KRT8P10-201ENST00000450021 1447 ntBASIC16.82■□□□□ 0.28
SPG11Q96JI7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPG11Q96JI7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SPG11Q96JI7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.81■□□□□ 0.28
SPG11Q96JI7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 AL023803.3-201ENST00000615559 522 ntBASIC16.81■□□□□ 0.28
SPG11Q96JI7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SPG11Q96JI7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPG11Q96JI7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.8■□□□□ 0.28
SPG11Q96JI7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 AP006587.1-201ENST00000534129 1502 ntBASIC16.8■□□□□ 0.28
SPG11Q96JI7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 COX11P1-201ENST00000489116 835 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms