Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
VPS50Q96JG6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 PGM5P4-201ENST00000421970 445 ntBASIC19.3■□□□□ 0.68
VPS50Q96JG6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.3■□□□□ 0.68
VPS50Q96JG6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
VPS50Q96JG6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
VPS50Q96JG6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS50Q96JG6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 AC116050.2-201ENST00000612102 1779 ntBASIC19.29■□□□□ 0.68
VPS50Q96JG6 BX323043.1-201ENST00000641006 1765 ntBASIC19.29■□□□□ 0.68
VPS50Q96JG6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 POU5F1P3-201ENST00000428824 1078 ntBASIC19.29■□□□□ 0.68
VPS50Q96JG6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS50Q96JG6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS50Q96JG6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 AC018445.3-201ENST00000624177 1945 ntBASIC19.28■□□□□ 0.68
VPS50Q96JG6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS50Q96JG6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS50Q96JG6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 KRT18P68-201ENST00000392293 1000 ntBASIC19.27■□□□□ 0.68
VPS50Q96JG6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS50Q96JG6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VPS50Q96JG6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.27■□□□□ 0.67
VPS50Q96JG6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS50Q96JG6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS50Q96JG6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS50Q96JG6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS50Q96JG6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 KRT18P29-201ENST00000397031 1267 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms