Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 AC116351.2-201ENST00000606540 1585 ntBASIC19.89■□□□□ 0.77
SIPA1Q96FS4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIPA1Q96FS4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.88■□□□□ 0.77
SIPA1Q96FS4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 MIR1238-201ENST00000408483 83 ntBASIC19.88■□□□□ 0.77
SIPA1Q96FS4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 AC116562.2-201ENST00000507042 360 ntBASIC19.88■□□□□ 0.77
SIPA1Q96FS4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.88■□□□□ 0.77
SIPA1Q96FS4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 MIR6786-201ENST00000616843 113 ntBASIC19.87■□□□□ 0.77
SIPA1Q96FS4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 TFP1-202ENST00000475455 1573 ntBASIC19.87■□□□□ 0.77
SIPA1Q96FS4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIPA1Q96FS4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 C1QL1P1-201ENST00000568105 661 ntBASIC19.86■□□□□ 0.77
SIPA1Q96FS4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIPA1Q96FS4 KRT8P9-201ENST00000558927 1449 ntBASIC19.85■□□□□ 0.77
SIPA1Q96FS4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 AC145285.6-201ENST00000604632 637 ntBASIC19.85■□□□□ 0.77
SIPA1Q96FS4 AL031985.4-201ENST00000642138 673 ntBASIC19.85■□□□□ 0.77
SIPA1Q96FS4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.85■□□□□ 0.77
SIPA1Q96FS4 AC018553.1-201ENST00000616682 1458 ntBASIC19.85■□□□□ 0.77
SIPA1Q96FS4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 TMPOP1-202ENST00000424642 1267 ntBASIC19.84■□□□□ 0.77
SIPA1Q96FS4 YBX1P10-201ENST00000444752 975 ntBASIC19.84■□□□□ 0.77
SIPA1Q96FS4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms