Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 AC023632.3-201ENST00000521633 145 ntBASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 AL121832.2-201ENST00000610979 668 ntBASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP1Q8TDR0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF3IP1Q8TDR0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF3IP1Q8TDR0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 AC083906.2-201ENST00000511578 360 ntBASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAF3IP1Q8TDR0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 AC125437.2-201ENST00000625180 2167 ntBASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF3IP1Q8TDR0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF3IP1Q8TDR0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms