Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 AL023973.1-201ENST00000624619 620 ntBASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ALMS1Q8TCU4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 AC009078.2-202ENST00000463353 338 ntBASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 KRT8P20-201ENST00000423953 1409 ntBASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ALMS1Q8TCU4 KRT17P6-201ENST00000453795 1220 ntBASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 HLA-G-202ENST00000376815 851 ntBASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 HLA-G-203ENST00000376818 1127 ntBASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 UNC93B7-201ENST00000509439 705 ntBASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 C1orf229-201ENST00000623686 2258 ntBASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 AC111152.3-201ENST00000569699 673 ntBASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ALMS1Q8TCU4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 CR769767.2-201ENST00000622735 460 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms