Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 MIR4497-201ENST00000583208 89 ntBASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC33Q8N5R6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 PGM5P4-201ENST00000421970 445 ntBASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 SNORA78-201ENST00000459373 127 ntBASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC33Q8N5R6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 AC006557.6-201ENST00000623071 864 ntBASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC33Q8N5R6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC33Q8N5R6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC33Q8N5R6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms