Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC027702.1-201ENST00000563810 1770 ntBASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC112191.1-201ENST00000523689 701 ntBASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 CYP2T3P-201ENST00000601990 817 ntBASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R3CPQ6ZMV5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 MCRIP2P1-201ENST00000394346 511 ntBASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 LUZP4P1-201ENST00000415420 344 ntBASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 RNU6-415P-201ENST00000516252 97 ntBASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC013731.1-201ENST00000604340 883 ntBASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.6■■□□□ 1.21
PPP4R3CPQ6ZMV5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 RFESDP1-201ENST00000422350 461 ntBASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 LINC01922-201ENST00000562582 719 ntBASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC068057.2-201ENST00000624047 895 ntBASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC120349.3-201ENST00000624377 529 ntBASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 MYC-209ENST00000641252 345 ntBASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 FP700111.2-201ENST00000619190 1892 ntBASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3CPQ6ZMV5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 BCAS2P3-201ENST00000416374 767 ntBASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AL355472.2-201ENST00000422958 438 ntBASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3CPQ6ZMV5 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms