Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBR4Q5T4S7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 KRT18P28-201ENST00000453838 1332 ntBASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AC073648.2-201ENST00000510116 352 ntBASIC10.93□□□□□ -0.66
UBR4Q5T4S7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AL121772.3-201ENST00000610840 674 ntBASIC10.93□□□□□ -0.66
UBR4Q5T4S7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC10.93□□□□□ -0.66
UBR4Q5T4S7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 DUSP8P4-201ENST00000399538 1761 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AC004980.1-204ENST00000429707 299 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 MFAP1P1-201ENST00000442257 1255 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 FGF14-AS2-201ENST00000606448 1074 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AF228730.6-201ENST00000641497 218 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AC084121.3-201ENST00000641716 218 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AC105233.6-201ENST00000642093 218 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 TSSC2-201ENST00000450217 709 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AC148477.8-201ENST00000624298 468 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 DNAJB3-202ENST00000449667 1266 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AP000867.3-201ENST00000524675 377 ntBASIC10.92□□□□□ -0.66
UBR4Q5T4S7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBR4Q5T4S7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 AC137767.1-201ENST00000602918 1920 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 AC116050.2-201ENST00000612102 1779 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 RPL13AP23-201ENST00000480739 586 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 SPCS2P1-201ENST00000561636 679 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms