Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.2■■□□□ 1.3
HTRA3P83110 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
HTRA3P83110 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
HTRA3P83110 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 STARP1-201ENST00000397973 869 ntBASIC23.2■■□□□ 1.3
HTRA3P83110 AL645929.1-201ENST00000420084 975 ntBASIC23.2■■□□□ 1.3
HTRA3P83110 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.2■■□□□ 1.3
HTRA3P83110 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.2■■□□□ 1.3
HTRA3P83110 AL662844.1-201ENST00000546340 181 ntBASIC23.2■■□□□ 1.3
HTRA3P83110 GCSHP2-201ENST00000560971 527 ntBASIC23.2■■□□□ 1.3
HTRA3P83110 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.2■■□□□ 1.3
HTRA3P83110 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.2■■□□□ 1.3
HTRA3P83110 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.2■■□□□ 1.3
HTRA3P83110 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTRA3P83110 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HTRA3P83110 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HTRA3P83110 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HTRA3P83110 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.19■■□□□ 1.3
HTRA3P83110 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HTRA3P83110 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.19■■□□□ 1.3
HTRA3P83110 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.19■■□□□ 1.3
HTRA3P83110 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.19■■□□□ 1.3
HTRA3P83110 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.19■■□□□ 1.3
HTRA3P83110 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.19■■□□□ 1.3
HTRA3P83110 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HTRA3P83110 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.19■■□□□ 1.3
HTRA3P83110 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
HTRA3P83110 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
HTRA3P83110 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.18■■□□□ 1.3
HTRA3P83110 SLC25A1P1-201ENST00000528351 927 ntBASIC23.18■■□□□ 1.3
HTRA3P83110 AC091304.2-201ENST00000564639 760 ntBASIC23.18■■□□□ 1.3
HTRA3P83110 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.18■■□□□ 1.3
HTRA3P83110 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
HTRA3P83110 AP002414.4-201ENST00000589764 1148 ntBASIC23.18■■□□□ 1.3
HTRA3P83110 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.18■■□□□ 1.3
HTRA3P83110 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
HTRA3P83110 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.18■■□□□ 1.3
HTRA3P83110 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
HTRA3P83110 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HTRA3P83110 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HTRA3P83110 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.17■■□□□ 1.3
HTRA3P83110 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.17■■□□□ 1.3
HTRA3P83110 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HTRA3P83110 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.17■■□□□ 1.3
HTRA3P83110 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HTRA3P83110 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HTRA3P83110 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.17■■□□□ 1.3
HTRA3P83110 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HTRA3P83110 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HTRA3P83110 BX119927.1-201ENST00000636596 1552 ntBASIC23.17■■□□□ 1.3
HTRA3P83110 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HTRA3P83110 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.17■■□□□ 1.3
HTRA3P83110 AP006587.1-201ENST00000534129 1502 ntBASIC23.17■■□□□ 1.3
HTRA3P83110 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HTRA3P83110 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
HTRA3P83110 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.16■■□□□ 1.3
HTRA3P83110 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.16■■□□□ 1.3
HTRA3P83110 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HTRA3P83110 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.16■■□□□ 1.3
HTRA3P83110 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.16■■□□□ 1.3
HTRA3P83110 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.16■■□□□ 1.3
HTRA3P83110 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
HTRA3P83110 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.16■■□□□ 1.3
HTRA3P83110 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTRA3P83110 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.16■■□□□ 1.3
HTRA3P83110 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HTRA3P83110 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.15■■□□□ 1.3
HTRA3P83110 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.15■■□□□ 1.3
HTRA3P83110 AC027796.2-201ENST00000575326 344 ntBASIC23.15■■□□□ 1.3
HTRA3P83110 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.15■■□□□ 1.3
HTRA3P83110 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
HTRA3P83110 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HTRA3P83110 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.15■■□□□ 1.3
HTRA3P83110 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.15■■□□□ 1.3
HTRA3P83110 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HTRA3P83110 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
HTRA3P83110 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HTRA3P83110 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms