Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 AL138781.1-201ENST00000566567 1274 ntBASIC17.31■□□□□ 0.36
HIST1H3AP68431 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 AL109923.1-201ENST00000618799 583 ntBASIC17.31■□□□□ 0.36
HIST1H3AP68431 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H3AP68431 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 AL390719.1-204ENST00000412397 1219 ntBASIC17.3■□□□□ 0.36
HIST1H3AP68431 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC090192.1-201ENST00000517740 490 ntBASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC142086.2-201ENST00000569753 217 ntBASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 HLA-B-256ENST00000639848 1089 ntBASIC17.3■□□□□ 0.36
HIST1H3AP68431 AL158211.5-201ENST00000623583 2518 ntBASIC17.3■□□□□ 0.36
HIST1H3AP68431 AC116351.2-201ENST00000606540 1585 ntBASIC17.3■□□□□ 0.36
HIST1H3AP68431 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H3AP68431 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIST1H3AP68431 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 AC104771.1-201ENST00000603335 964 ntBASIC17.29■□□□□ 0.36
HIST1H3AP68431 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.29■□□□□ 0.36
HIST1H3AP68431 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H3AP68431 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H3AP68431 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H3AP68431 AC098934.4-201ENST00000564127 592 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms