Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YBX1P67809 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.31■□□□□ 0.68
YBX1P67809 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YBX1P67809 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YBX1P67809 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
YBX1P67809 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YBX1P67809 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.31■□□□□ 0.68
YBX1P67809 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.31■□□□□ 0.68
YBX1P67809 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.31■□□□□ 0.68
YBX1P67809 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
YBX1P67809 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
YBX1P67809 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
YBX1P67809 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.3■□□□□ 0.68
YBX1P67809 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
YBX1P67809 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.3■□□□□ 0.68
YBX1P67809 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
YBX1P67809 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.3■□□□□ 0.68
YBX1P67809 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
YBX1P67809 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.3■□□□□ 0.68
YBX1P67809 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.3■□□□□ 0.68
YBX1P67809 UNC93B5-201ENST00000530315 699 ntBASIC19.3■□□□□ 0.68
YBX1P67809 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.3■□□□□ 0.68
YBX1P67809 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.3■□□□□ 0.68
YBX1P67809 AC008403.3-201ENST00000598924 454 ntBASIC19.3■□□□□ 0.68
YBX1P67809 KRT8P17-201ENST00000453110 1448 ntBASIC19.3■□□□□ 0.68
YBX1P67809 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.3■□□□□ 0.68
YBX1P67809 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.3■□□□□ 0.68
YBX1P67809 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YBX1P67809 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.29■□□□□ 0.68
YBX1P67809 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 AL691432.2-201ENST00000607222 2038 ntBASIC19.29■□□□□ 0.68
YBX1P67809 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
YBX1P67809 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.29■□□□□ 0.68
YBX1P67809 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
YBX1P67809 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.29■□□□□ 0.68
YBX1P67809 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.29■□□□□ 0.68
YBX1P67809 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.29■□□□□ 0.68
YBX1P67809 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.29■□□□□ 0.68
YBX1P67809 AC005829.2-201ENST00000571422 1056 ntBASIC19.29■□□□□ 0.68
YBX1P67809 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.29■□□□□ 0.68
YBX1P67809 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
YBX1P67809 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
YBX1P67809 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.28■□□□□ 0.68
YBX1P67809 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.28■□□□□ 0.68
YBX1P67809 AC124283.5-201ENST00000624661 1809 ntBASIC19.28■□□□□ 0.68
YBX1P67809 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
YBX1P67809 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.28■□□□□ 0.68
YBX1P67809 TSPY20P-201ENST00000450910 630 ntBASIC19.28■□□□□ 0.68
YBX1P67809 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 AC023632.3-201ENST00000521633 145 ntBASIC19.28■□□□□ 0.68
YBX1P67809 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.28■□□□□ 0.68
YBX1P67809 SOX15-203ENST00000570788 1093 ntBASIC19.28■□□□□ 0.68
YBX1P67809 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
YBX1P67809 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
YBX1P67809 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YBX1P67809 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
YBX1P67809 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.27■□□□□ 0.68
YBX1P67809 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.27■□□□□ 0.68
YBX1P67809 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.27■□□□□ 0.68
YBX1P67809 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
YBX1P67809 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms