Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.94■■□□□ 1.1
CDK7P50613 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK7P50613 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK7P50613 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK7P50613 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK7P50613 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK7P50613 INGX-201ENST00000359239 846 ntBASIC21.94■■□□□ 1.1
CDK7P50613 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDK7P50613 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.94■■□□□ 1.1
CDK7P50613 AC004980.1-204ENST00000429707 299 ntBASIC21.94■■□□□ 1.1
CDK7P50613 BX664615.1-201ENST00000443558 458 ntBASIC21.94■■□□□ 1.1
CDK7P50613 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.94■■□□□ 1.1
CDK7P50613 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.94■■□□□ 1.1
CDK7P50613 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CDK7P50613 FAM87A-204ENST00000613235 858 ntBASIC21.94■■□□□ 1.1
CDK7P50613 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.94■■□□□ 1.1
CDK7P50613 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK7P50613 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.94■■□□□ 1.1
CDK7P50613 AP006587.1-201ENST00000534129 1502 ntBASIC21.94■■□□□ 1.1
CDK7P50613 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CDK7P50613 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK7P50613 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK7P50613 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CDK7P50613 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CDK7P50613 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CDK7P50613 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CDK7P50613 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.93■■□□□ 1.1
CDK7P50613 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK7P50613 AC097488.1-201ENST00000507834 756 ntBASIC21.93■■□□□ 1.1
CDK7P50613 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.93■■□□□ 1.1
CDK7P50613 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.93■■□□□ 1.1
CDK7P50613 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDK7P50613 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CDK7P50613 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.92■■□□□ 1.1
CDK7P50613 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDK7P50613 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 AK4P3-201ENST00000418260 669 ntBASIC21.92■■□□□ 1.1
CDK7P50613 AC063952.2-201ENST00000498792 1227 ntBASIC21.92■■□□□ 1.1
CDK7P50613 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.92■■□□□ 1.1
CDK7P50613 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.92■■□□□ 1.1
CDK7P50613 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.92■■□□□ 1.1
CDK7P50613 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.92■■□□□ 1.1
CDK7P50613 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDK7P50613 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDK7P50613 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 CRYGFP-201ENST00000418459 633 ntBASIC21.91■■□□□ 1.1
CDK7P50613 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK7P50613 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK7P50613 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.91■■□□□ 1.1
CDK7P50613 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.91■■□□□ 1.1
CDK7P50613 AC128688.1-201ENST00000487626 519 ntBASIC21.91■■□□□ 1.1
CDK7P50613 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.91■■□□□ 1.1
CDK7P50613 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK7P50613 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
CDK7P50613 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.91■■□□□ 1.1
CDK7P50613 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDK7P50613 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDK7P50613 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.9■■□□□ 1.1
CDK7P50613 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.9■■□□□ 1.1
CDK7P50613 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK7P50613 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDK7P50613 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK7P50613 AC022616.7-201ENST00000525383 220 ntBASIC21.9■■□□□ 1.1
CDK7P50613 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDK7P50613 AC130371.2-201ENST00000619443 611 ntBASIC21.9■■□□□ 1.1
CDK7P50613 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDK7P50613 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK7P50613 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.9■■□□□ 1.1
CDK7P50613 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms