Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC35.31■■■■□ 3.24
NCAPD3P42695 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
NCAPD3P42695 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC35.31■■■■□ 3.24
NCAPD3P42695 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
NCAPD3P42695 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
NCAPD3P42695 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC35.3■■■■□ 3.24
NCAPD3P42695 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC35.3■■■■□ 3.24
NCAPD3P42695 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
NCAPD3P42695 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
NCAPD3P42695 CA15P1-201ENST00000481698 905 ntBASIC35.29■■■■□ 3.24
NCAPD3P42695 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC35.29■■■■□ 3.24
NCAPD3P42695 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC35.29■■■■□ 3.24
NCAPD3P42695 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
NCAPD3P42695 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC35.29■■■■□ 3.24
NCAPD3P42695 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC35.29■■■■□ 3.24
NCAPD3P42695 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
NCAPD3P42695 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
NCAPD3P42695 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
NCAPD3P42695 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.28■■■■□ 3.24
NCAPD3P42695 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC35.28■■■■□ 3.24
NCAPD3P42695 LY6E-213ENST00000522528 606 ntTSL 3 BASIC35.28■■■■□ 3.24
NCAPD3P42695 ZNF444P1-201ENST00000559497 298 ntBASIC35.28■■■■□ 3.24
NCAPD3P42695 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
NCAPD3P42695 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC35.27■■■■□ 3.24
NCAPD3P42695 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
NCAPD3P42695 GOLGA6L3-201ENST00000507199 1679 ntBASIC35.27■■■■□ 3.24
NCAPD3P42695 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
NCAPD3P42695 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
NCAPD3P42695 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC35.27■■■■□ 3.24
NCAPD3P42695 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
NCAPD3P42695 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
NCAPD3P42695 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
NCAPD3P42695 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC35.26■■■■□ 3.24
NCAPD3P42695 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC35.26■■■■□ 3.24
NCAPD3P42695 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
NCAPD3P42695 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.23
NCAPD3P42695 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC35.26■■■■□ 3.23
NCAPD3P42695 SPDYE13P-201ENST00000445314 798 ntBASIC35.26■■■■□ 3.23
NCAPD3P42695 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC35.26■■■■□ 3.23
NCAPD3P42695 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.23
NCAPD3P42695 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC35.25■■■■□ 3.23
NCAPD3P42695 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 SNX5-210ENST00000481323 562 ntTSL 3 BASIC35.25■■■■□ 3.23
NCAPD3P42695 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC35.25■■■■□ 3.23
NCAPD3P42695 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC35.25■■■■□ 3.23
NCAPD3P42695 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC35.25■■■■□ 3.23
NCAPD3P42695 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC35.25■■■■□ 3.23
NCAPD3P42695 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
NCAPD3P42695 DYM-203ENST00000442713 2147 ntTSL 2 BASIC35.25■■■■□ 3.23
NCAPD3P42695 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC35.25■■■■□ 3.23
NCAPD3P42695 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC35.24■■■■□ 3.23
NCAPD3P42695 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC35.24■■■■□ 3.23
NCAPD3P42695 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
NCAPD3P42695 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
NCAPD3P42695 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC35.24■■■■□ 3.23
NCAPD3P42695 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
NCAPD3P42695 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC35.24■■■■□ 3.23
NCAPD3P42695 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC35.24■■■■□ 3.23
NCAPD3P42695 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC35.24■■■■□ 3.23
NCAPD3P42695 AC023511.2-201ENST00000618803 211 ntBASIC35.24■■■■□ 3.23
NCAPD3P42695 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC35.24■■■■□ 3.23
NCAPD3P42695 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
NCAPD3P42695 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC35.24■■■■□ 3.23
NCAPD3P42695 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC35.24■■■■□ 3.23
NCAPD3P42695 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC35.23■■■■□ 3.23
NCAPD3P42695 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC35.23■■■■□ 3.23
NCAPD3P42695 AC112907.2-201ENST00000448639 330 ntBASIC35.23■■■■□ 3.23
NCAPD3P42695 KRT17P6-201ENST00000453795 1220 ntBASIC35.23■■■■□ 3.23
NCAPD3P42695 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC35.23■■■■□ 3.23
NCAPD3P42695 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
NCAPD3P42695 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC35.23■■■■□ 3.23
NCAPD3P42695 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC35.22■■■■□ 3.23
NCAPD3P42695 GLRB-205ENST00000512619 728 ntTSL 3 BASIC35.22■■■■□ 3.23
NCAPD3P42695 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC35.22■■■■□ 3.23
NCAPD3P42695 RN7SL510P-201ENST00000581311 263 ntBASIC35.22■■■■□ 3.23
NCAPD3P42695 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC35.22■■■■□ 3.23
NCAPD3P42695 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC35.22■■■■□ 3.23
NCAPD3P42695 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC35.22■■■■□ 3.23
NCAPD3P42695 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC35.22■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms