Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.21■■□□□ 1.63
COL15A1P39059 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.21■■□□□ 1.63
COL15A1P39059 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.21■■□□□ 1.63
COL15A1P39059 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.2■■□□□ 1.63
COL15A1P39059 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.2■■□□□ 1.63
COL15A1P39059 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
COL15A1P39059 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
COL15A1P39059 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL15A1P39059 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL15A1P39059 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL15A1P39059 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
COL15A1P39059 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL15A1P39059 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL15A1P39059 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.2■■□□□ 1.62
COL15A1P39059 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL15A1P39059 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL15A1P39059 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL15A1P39059 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
COL15A1P39059 AC104076.2-201ENST00000448912 469 ntBASIC25.19■■□□□ 1.62
COL15A1P39059 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 NTF6B-201ENST00000591913 560 ntBASIC25.19■■□□□ 1.62
COL15A1P39059 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.19■■□□□ 1.62
COL15A1P39059 AC006011.2-201ENST00000621313 1158 ntBASIC25.19■■□□□ 1.62
COL15A1P39059 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.19■■□□□ 1.62
COL15A1P39059 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL15A1P39059 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
COL15A1P39059 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL15A1P39059 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.19■■□□□ 1.62
COL15A1P39059 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
COL15A1P39059 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.19■■□□□ 1.62
COL15A1P39059 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
COL15A1P39059 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.19■■□□□ 1.62
COL15A1P39059 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL15A1P39059 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.18■■□□□ 1.62
COL15A1P39059 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.18■■□□□ 1.62
COL15A1P39059 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.18■■□□□ 1.62
COL15A1P39059 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
COL15A1P39059 C2orf69P3-201ENST00000565542 1120 ntBASIC25.18■■□□□ 1.62
COL15A1P39059 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL15A1P39059 AC116351.2-201ENST00000606540 1585 ntBASIC25.18■■□□□ 1.62
COL15A1P39059 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL15A1P39059 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.18■■□□□ 1.62
COL15A1P39059 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL15A1P39059 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
COL15A1P39059 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.18■■□□□ 1.62
COL15A1P39059 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.18■■□□□ 1.62
COL15A1P39059 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL15A1P39059 YBX1P10-201ENST00000444752 975 ntBASIC25.18■■□□□ 1.62
COL15A1P39059 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.18■■□□□ 1.62
COL15A1P39059 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL15A1P39059 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.17■■□□□ 1.62
COL15A1P39059 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.17■■□□□ 1.62
COL15A1P39059 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.17■■□□□ 1.62
COL15A1P39059 FP700111.2-201ENST00000619190 1892 ntBASIC25.17■■□□□ 1.62
COL15A1P39059 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
COL15A1P39059 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
COL15A1P39059 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.17■■□□□ 1.62
COL15A1P39059 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
COL15A1P39059 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 AC004980.1-204ENST00000429707 299 ntBASIC25.17■■□□□ 1.62
COL15A1P39059 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.17■■□□□ 1.62
COL15A1P39059 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.17■■□□□ 1.62
COL15A1P39059 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL15A1P39059 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
COL15A1P39059 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.16■■□□□ 1.62
COL15A1P39059 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.16■■□□□ 1.62
COL15A1P39059 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
COL15A1P39059 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
COL15A1P39059 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 WWOX-216ENST00000569818 525 ntBASIC25.16■■□□□ 1.62
COL15A1P39059 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
COL15A1P39059 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.16■■□□□ 1.62
COL15A1P39059 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.16■■□□□ 1.62
COL15A1P39059 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL15A1P39059 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
COL15A1P39059 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.16■■□□□ 1.62
COL15A1P39059 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
COL15A1P39059 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms