Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EPHA3P29320 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EPHA3P29320 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHA3P29320 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHA3P29320 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHA3P29320 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHA3P29320 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHA3P29320 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
EPHA3P29320 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EPHA3P29320 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA3P29320 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHA3P29320 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EPHA3P29320 KRT8P17-201ENST00000453110 1448 ntBASIC19.25■□□□□ 0.67
EPHA3P29320 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHA3P29320 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
EPHA3P29320 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA3P29320 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EPHA3P29320 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA3P29320 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA3P29320 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHA3P29320 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.24■□□□□ 0.67
EPHA3P29320 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHA3P29320 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHA3P29320 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHA3P29320 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHA3P29320 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
EPHA3P29320 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHA3P29320 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA3P29320 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHA3P29320 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHA3P29320 KRT18P61-201ENST00000585825 1298 ntBASIC19.23■□□□□ 0.67
EPHA3P29320 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHA3P29320 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
EPHA3P29320 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EPHA3P29320 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA3P29320 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHA3P29320 NEFHP1-201ENST00000412845 2629 ntBASIC19.22■□□□□ 0.67
EPHA3P29320 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 KRT19P1-201ENST00000405746 1186 ntBASIC19.22■□□□□ 0.67
EPHA3P29320 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.22■□□□□ 0.67
EPHA3P29320 MYCNOS-205ENST00000641950 531 ntBASIC19.22■□□□□ 0.67
EPHA3P29320 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EPHA3P29320 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
EPHA3P29320 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
EPHA3P29320 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA3P29320 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
EPHA3P29320 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EPHA3P29320 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms