Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF4P23510 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF4P23510 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF4P23510 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF4P23510 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF4P23510 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF4P23510 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TNFSF4P23510 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF4P23510 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF4P23510 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFSF4P23510 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFSF4P23510 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFSF4P23510 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
TNFSF4P23510 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TNFSF4P23510 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF4P23510 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF4P23510 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFSF4P23510 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF4P23510 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.91■□□□□ 0.3
TNFSF4P23510 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TNFSF4P23510 AC008403.3-201ENST00000598924 454 ntBASIC16.91■□□□□ 0.3
TNFSF4P23510 ITM2C-210ENST00000620962 501 ntBASIC16.91■□□□□ 0.3
TNFSF4P23510 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFSF4P23510 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.91■□□□□ 0.3
TNFSF4P23510 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNFSF4P23510 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFSF4P23510 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TNFSF4P23510 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.9■□□□□ 0.3
TNFSF4P23510 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TNFSF4P23510 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFSF4P23510 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFSF4P23510 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.9■□□□□ 0.3
TNFSF4P23510 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.9■□□□□ 0.3
TNFSF4P23510 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TNFSF4P23510 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFSF4P23510 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFSF4P23510 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
TNFSF4P23510 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.89■□□□□ 0.3
TNFSF4P23510 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TNFSF4P23510 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 ABHD17AP1-201ENST00000358206 933 ntBASIC16.89■□□□□ 0.29
TNFSF4P23510 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFSF4P23510 AC128676.1-201ENST00000454392 318 ntBASIC16.89■□□□□ 0.29
TNFSF4P23510 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFSF4P23510 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.89■□□□□ 0.29
TNFSF4P23510 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFSF4P23510 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TNFSF4P23510 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TNFSF4P23510 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms