Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
COL11A2P13942 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
COL11A2P13942 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
COL11A2P13942 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.4■■□□□ 1.5
COL11A2P13942 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.4■■□□□ 1.5
COL11A2P13942 Z85996.1-201ENST00000494644 937 ntBASIC24.4■■□□□ 1.5
COL11A2P13942 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 AC121338.2-201ENST00000622535 1744 ntBASIC24.4■■□□□ 1.5
COL11A2P13942 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
COL11A2P13942 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL11A2P13942 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
COL11A2P13942 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
COL11A2P13942 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL11A2P13942 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.39■■□□□ 1.5
COL11A2P13942 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL11A2P13942 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
COL11A2P13942 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL11A2P13942 RNF152P1-201ENST00000397754 604 ntBASIC24.39■■□□□ 1.5
COL11A2P13942 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.39■■□□□ 1.5
COL11A2P13942 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.39■■□□□ 1.5
COL11A2P13942 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL11A2P13942 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.39■■□□□ 1.5
COL11A2P13942 AC093458.2-201ENST00000623150 629 ntBASIC24.39■■□□□ 1.5
COL11A2P13942 AC005332.1-201ENST00000577698 1310 ntBASIC24.39■■□□□ 1.49
COL11A2P13942 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL11A2P13942 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
COL11A2P13942 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.38■■□□□ 1.49
COL11A2P13942 AC004951.3-201ENST00000418645 1148 ntBASIC24.38■■□□□ 1.49
COL11A2P13942 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.38■■□□□ 1.49
COL11A2P13942 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.38■■□□□ 1.49
COL11A2P13942 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.38■■□□□ 1.49
COL11A2P13942 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
COL11A2P13942 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
COL11A2P13942 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
COL11A2P13942 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 AC008040.2-201ENST00000461049 708 ntBASIC24.38■■□□□ 1.49
COL11A2P13942 FAM86EP-206ENST00000510506 987 ntBASIC24.38■■□□□ 1.49
COL11A2P13942 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.38■■□□□ 1.49
COL11A2P13942 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.38■■□□□ 1.49
COL11A2P13942 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL11A2P13942 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.37■■□□□ 1.49
COL11A2P13942 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.37■■□□□ 1.49
COL11A2P13942 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
COL11A2P13942 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.37■■□□□ 1.49
COL11A2P13942 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.37■■□□□ 1.49
COL11A2P13942 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
COL11A2P13942 AC008622.2-201ENST00000617006 1229 ntBASIC24.37■■□□□ 1.49
COL11A2P13942 AC141257.4-201ENST00000634557 245 ntBASIC24.37■■□□□ 1.49
COL11A2P13942 AC136944.6-201ENST00000634818 245 ntBASIC24.37■■□□□ 1.49
COL11A2P13942 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.37■■□□□ 1.49
COL11A2P13942 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
COL11A2P13942 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.37■■□□□ 1.49
COL11A2P13942 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL11A2P13942 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.36■■□□□ 1.49
COL11A2P13942 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.36■■□□□ 1.49
COL11A2P13942 PHGDH-210ENST00000641115 1638 ntBASIC24.36■■□□□ 1.49
COL11A2P13942 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.36■■□□□ 1.49
COL11A2P13942 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 PCED1CP-201ENST00000419887 785 ntBASIC24.36■■□□□ 1.49
COL11A2P13942 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.36■■□□□ 1.49
COL11A2P13942 BX664615.1-201ENST00000443558 458 ntBASIC24.36■■□□□ 1.49
COL11A2P13942 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.36■■□□□ 1.49
COL11A2P13942 AC010653.2-201ENST00000623505 997 ntBASIC24.36■■□□□ 1.49
COL11A2P13942 AL121956.5-201ENST00000625261 221 ntBASIC24.36■■□□□ 1.49
COL11A2P13942 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
COL11A2P13942 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.36■■□□□ 1.49
COL11A2P13942 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.36■■□□□ 1.49
COL11A2P13942 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL11A2P13942 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms