Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.83■□□□□ 0.12
SFTA3P0C7M3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.83■□□□□ 0.12
SFTA3P0C7M3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 GUSBP5-201ENST00000418136 578 ntBASIC15.82■□□□□ 0.12
SFTA3P0C7M3 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 AC090164.3-201ENST00000610780 2143 ntBASIC15.82■□□□□ 0.12
SFTA3P0C7M3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SFTA3P0C7M3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SFTA3P0C7M3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.8■□□□□ 0.12
SFTA3P0C7M3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms