Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 AL355355.2-201ENST00000442321 338 ntBASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 AL355075.4-201ENST00000554988 638 ntBASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 AL353708.3-201ENST00000610272 989 ntBASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 AP003071.4-201ENST00000562276 1284 ntBASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40ALP0C0E4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB40ALP0C0E4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 AC006128.1-201ENST00000624704 1661 ntBASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 AC087499.1-201ENST00000418141 1075 ntBASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 TSPY15P-201ENST00000457163 923 ntBASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 AP002982.1-201ENST00000492365 877 ntBASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms