Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.02■□□□□ 0.48
FREM3P0C091 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
FREM3P0C091 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.02■□□□□ 0.48
FREM3P0C091 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
FREM3P0C091 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.02■□□□□ 0.48
FREM3P0C091 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.02■□□□□ 0.48
FREM3P0C091 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FREM3P0C091 KRT8P20-201ENST00000423953 1409 ntBASIC18.02■□□□□ 0.48
FREM3P0C091 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
FREM3P0C091 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.02■□□□□ 0.48
FREM3P0C091 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.02■□□□□ 0.48
FREM3P0C091 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
FREM3P0C091 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FREM3P0C091 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
FREM3P0C091 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
FREM3P0C091 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
FREM3P0C091 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.02■□□□□ 0.47
FREM3P0C091 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
FREM3P0C091 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.02■□□□□ 0.47
FREM3P0C091 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.02■□□□□ 0.47
FREM3P0C091 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.02■□□□□ 0.47
FREM3P0C091 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.02■□□□□ 0.47
FREM3P0C091 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.02■□□□□ 0.47
FREM3P0C091 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.02■□□□□ 0.47
FREM3P0C091 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FREM3P0C091 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.01■□□□□ 0.47
FREM3P0C091 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.01■□□□□ 0.47
FREM3P0C091 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
FREM3P0C091 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
FREM3P0C091 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FREM3P0C091 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
FREM3P0C091 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18■□□□□ 0.47
FREM3P0C091 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
FREM3P0C091 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 NBPF21P-201ENST00000425093 1451 ntBASIC18■□□□□ 0.47
FREM3P0C091 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18■□□□□ 0.47
FREM3P0C091 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FREM3P0C091 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18■□□□□ 0.47
FREM3P0C091 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18■□□□□ 0.47
FREM3P0C091 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18■□□□□ 0.47
FREM3P0C091 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18■□□□□ 0.47
FREM3P0C091 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FREM3P0C091 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.99■□□□□ 0.47
FREM3P0C091 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
FREM3P0C091 AC110285.5-201ENST00000611501 352 ntBASIC17.99■□□□□ 0.47
FREM3P0C091 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FREM3P0C091 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.99■□□□□ 0.47
FREM3P0C091 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.99■□□□□ 0.47
FREM3P0C091 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FREM3P0C091 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
FREM3P0C091 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.99■□□□□ 0.47
FREM3P0C091 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.99■□□□□ 0.47
FREM3P0C091 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.99■□□□□ 0.47
FREM3P0C091 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms