Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P04436 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.1■□□□□ 0.49
P04436 AC012618.2-201ENST00000428058 849 ntBASIC18.1■□□□□ 0.49
P04436 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04436 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.1■□□□□ 0.49
P04436 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.1■□□□□ 0.49
P04436 RARRES2P10-201ENST00000564312 460 ntBASIC18.1■□□□□ 0.49
P04436 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.1■□□□□ 0.49
P04436 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.1■□□□□ 0.49
P04436 Z99916.2-201ENST00000604037 246 ntBASIC18.1■□□□□ 0.49
P04436 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04436 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04436 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P04436 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P04436 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
P04436 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
P04436 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
P04436 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
P04436 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.09■□□□□ 0.49
P04436 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.09■□□□□ 0.49
P04436 AC018553.1-201ENST00000616682 1458 ntBASIC18.09■□□□□ 0.49
P04436 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.09■□□□□ 0.49
P04436 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.09■□□□□ 0.49
P04436 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 RPS2P55-201ENST00000397318 883 ntBASIC18.09■□□□□ 0.49
P04436 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
P04436 AC107956.1-201ENST00000494359 873 ntBASIC18.09■□□□□ 0.49
P04436 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.09■□□□□ 0.49
P04436 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.09■□□□□ 0.49
P04436 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04436 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.09■□□□□ 0.49
P04436 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
P04436 BX119927.1-201ENST00000636596 1552 ntBASIC18.08■□□□□ 0.49
P04436 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
P04436 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
P04436 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
P04436 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
P04436 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
P04436 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
P04436 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
P04436 AP005212.1-201ENST00000581547 1997 ntBASIC18.08■□□□□ 0.49
P04436 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.08■□□□□ 0.49
P04436 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
P04436 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
P04436 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.08■□□□□ 0.48
P04436 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.08■□□□□ 0.48
P04436 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.08■□□□□ 0.48
P04436 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.08■□□□□ 0.48
P04436 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.08■□□□□ 0.48
P04436 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 FEM1AP1-201ENST00000431297 1995 ntBASIC18.08■□□□□ 0.48
P04436 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04436 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.08■□□□□ 0.48
P04436 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.07■□□□□ 0.48
P04436 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P04436 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.07■□□□□ 0.48
P04436 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
P04436 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
P04436 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P04436 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.07■□□□□ 0.48
P04436 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.07■□□□□ 0.48
P04436 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.07■□□□□ 0.48
P04436 AC233702.5-201ENST00000584107 538 ntBASIC18.07■□□□□ 0.48
P04436 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P04436 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms