Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VTNP04004 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.76■■□□□ 1.07
VTNP04004 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 CR392000.1-201ENST00000624770 1228 ntBASIC21.76■■□□□ 1.07
VTNP04004 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VTNP04004 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VTNP04004 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
VTNP04004 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VTNP04004 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VTNP04004 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.75■■□□□ 1.07
VTNP04004 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 NIFKP9-201ENST00000419265 221 ntBASIC21.75■■□□□ 1.07
VTNP04004 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.75■■□□□ 1.07
VTNP04004 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.75■■□□□ 1.07
VTNP04004 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.75■■□□□ 1.07
VTNP04004 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.75■■□□□ 1.07
VTNP04004 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.75■■□□□ 1.07
VTNP04004 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.75■■□□□ 1.07
VTNP04004 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
VTNP04004 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.75■■□□□ 1.07
VTNP04004 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTNP04004 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.74■■□□□ 1.07
VTNP04004 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.74■■□□□ 1.07
VTNP04004 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.74■■□□□ 1.07
VTNP04004 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.74■■□□□ 1.07
VTNP04004 NUDT16P1-203ENST00000513809 620 ntBASIC21.74■■□□□ 1.07
VTNP04004 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.74■■□□□ 1.07
VTNP04004 LINC01023-201ENST00000606054 436 ntBASIC21.74■■□□□ 1.07
VTNP04004 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.74■■□□□ 1.07
VTNP04004 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.74■■□□□ 1.07
VTNP04004 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.74■■□□□ 1.07
VTNP04004 AC133561.5-201ENST00000635547 218 ntBASIC21.74■■□□□ 1.07
VTNP04004 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.74■■□□□ 1.07
VTNP04004 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
VTNP04004 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTNP04004 BX119927.1-201ENST00000636596 1552 ntBASIC21.74■■□□□ 1.07
VTNP04004 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTNP04004 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.73■■□□□ 1.07
VTNP04004 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VTNP04004 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.73■■□□□ 1.07
VTNP04004 REXO1L10P-201ENST00000615707 1290 ntBASIC21.73■■□□□ 1.07
VTNP04004 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VTNP04004 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
VTNP04004 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VTNP04004 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VTNP04004 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.73■■□□□ 1.07
VTNP04004 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.72■■□□□ 1.07
VTNP04004 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 YBX1P10-201ENST00000444752 975 ntBASIC21.72■■□□□ 1.07
VTNP04004 KSR1P1-201ENST00000446298 240 ntBASIC21.72■■□□□ 1.07
VTNP04004 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.72■■□□□ 1.07
VTNP04004 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.72■■□□□ 1.07
VTNP04004 C1QL1P1-201ENST00000568105 661 ntBASIC21.72■■□□□ 1.07
VTNP04004 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
VTNP04004 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.72■■□□□ 1.07
VTNP04004 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
VTNP04004 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTNP04004 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.72■■□□□ 1.07
VTNP04004 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.71■■□□□ 1.07
VTNP04004 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTNP04004 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms