Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.63■■□□□ 1.05
CHRNA1P02708 AC011506.1-201ENST00000474329 610 ntBASIC21.63■■□□□ 1.05
CHRNA1P02708 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
CHRNA1P02708 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.63■■□□□ 1.05
CHRNA1P02708 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHRNA1P02708 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.63■■□□□ 1.05
CHRNA1P02708 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.63■■□□□ 1.05
CHRNA1P02708 AC004980.1-204ENST00000429707 299 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.62■■□□□ 1.05
CHRNA1P02708 TUBB8P6-201ENST00000436895 1288 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 KRT18P57-201ENST00000443599 1254 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.62■■□□□ 1.05
CHRNA1P02708 B3GAT3P1-201ENST00000471720 806 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 AL049597.2-201ENST00000565575 961 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 AC026271.3-201ENST00000571884 352 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHRNA1P02708 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHRNA1P02708 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHRNA1P02708 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHRNA1P02708 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 AC073508.3-201ENST00000619697 1419 ntBASIC21.62■■□□□ 1.05
CHRNA1P02708 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.62■■□□□ 1.05
CHRNA1P02708 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHRNA1P02708 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHRNA1P02708 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.61■■□□□ 1.05
CHRNA1P02708 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.61■■□□□ 1.05
CHRNA1P02708 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 TERF1P1-201ENST00000311003 1181 ntBASIC21.61■■□□□ 1.05
CHRNA1P02708 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.61■■□□□ 1.05
CHRNA1P02708 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.61■■□□□ 1.05
CHRNA1P02708 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.61■■□□□ 1.05
CHRNA1P02708 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 PHGDH-210ENST00000641115 1638 ntBASIC21.61■■□□□ 1.05
CHRNA1P02708 SMG8-203ENST00000578922 2178 ntBASIC21.61■■□□□ 1.05
CHRNA1P02708 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.61■■□□□ 1.05
CHRNA1P02708 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHRNA1P02708 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRNA1P02708 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHRNA1P02708 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHRNA1P02708 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRNA1P02708 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRNA1P02708 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRNA1P02708 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRNA1P02708 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRNA1P02708 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.6■■□□□ 1.05
CHRNA1P02708 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRNA1P02708 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHRNA1P02708 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.6■■□□□ 1.05
CHRNA1P02708 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRNA1P02708 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.6■■□□□ 1.05
CHRNA1P02708 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRNA1P02708 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.59■■□□□ 1.05
CHRNA1P02708 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.59■■□□□ 1.05
CHRNA1P02708 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.59■■□□□ 1.05
CHRNA1P02708 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CHRNA1P02708 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.59■■□□□ 1.05
CHRNA1P02708 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.59■■□□□ 1.05
CHRNA1P02708 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.59■■□□□ 1.05
CHRNA1P02708 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRNA1P02708 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHRNA1P02708 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.59■■□□□ 1.05
CHRNA1P02708 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.58■■□□□ 1.05
CHRNA1P02708 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHRNA1P02708 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.58■■□□□ 1.05
CHRNA1P02708 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CHRNA1P02708 ARMC10P1-201ENST00000313754 855 ntBASIC21.58■■□□□ 1.05
CHRNA1P02708 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.58■■□□□ 1.05
CHRNA1P02708 SLC25A3P1-201ENST00000443844 931 ntBASIC21.58■■□□□ 1.05
CHRNA1P02708 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.58■■□□□ 1.05
CHRNA1P02708 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHRNA1P02708 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.58■■□□□ 1.05
CHRNA1P02708 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.58■■□□□ 1.05
CHRNA1P02708 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHRNA1P02708 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CHRNA1P02708 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CHRNA1P02708 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.58■■□□□ 1.04
CHRNA1P02708 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.58■■□□□ 1.04
CHRNA1P02708 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
CHRNA1P02708 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms