Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.86■□□□□ 0.93
BEST1O76090 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BEST1O76090 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
BEST1O76090 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 TCF3P1-201ENST00000423021 1937 ntBASIC20.85■□□□□ 0.93
BEST1O76090 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.85■□□□□ 0.93
BEST1O76090 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 AC093827.2-201ENST00000512654 315 ntBASIC20.85■□□□□ 0.93
BEST1O76090 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
BEST1O76090 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BEST1O76090 PCDHAC2-203ENST00000615316 3011 ntBASIC20.85■□□□□ 0.93
BEST1O76090 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.84■□□□□ 0.93
BEST1O76090 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BEST1O76090 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.84■□□□□ 0.93
BEST1O76090 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
BEST1O76090 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.84■□□□□ 0.93
BEST1O76090 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.84■□□□□ 0.93
BEST1O76090 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
BEST1O76090 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.84■□□□□ 0.93
BEST1O76090 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.84■□□□□ 0.93
BEST1O76090 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.84■□□□□ 0.93
BEST1O76090 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
BEST1O76090 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BEST1O76090 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
BEST1O76090 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
BEST1O76090 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BEST1O76090 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BEST1O76090 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BEST1O76090 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.83■□□□□ 0.93
BEST1O76090 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BEST1O76090 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.83■□□□□ 0.93
BEST1O76090 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BEST1O76090 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST1O76090 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST1O76090 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BEST1O76090 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST1O76090 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
BEST1O76090 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.82■□□□□ 0.92
BEST1O76090 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.82■□□□□ 0.92
BEST1O76090 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.82■□□□□ 0.92
BEST1O76090 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
BEST1O76090 Z99916.2-201ENST00000604037 246 ntBASIC20.82■□□□□ 0.92
BEST1O76090 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.82■□□□□ 0.92
BEST1O76090 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST1O76090 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.82■□□□□ 0.92
BEST1O76090 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.81■□□□□ 0.92
BEST1O76090 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
BEST1O76090 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST1O76090 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST1O76090 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST1O76090 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BEST1O76090 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BEST1O76090 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.81■□□□□ 0.92
BEST1O76090 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BEST1O76090 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BEST1O76090 AC008550.1-201ENST00000511500 884 ntBASIC20.81■□□□□ 0.92
BEST1O76090 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST1O76090 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.81■□□□□ 0.92
BEST1O76090 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.81■□□□□ 0.92
BEST1O76090 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
BEST1O76090 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.81■□□□□ 0.92
BEST1O76090 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST1O76090 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST1O76090 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
BEST1O76090 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST1O76090 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.8■□□□□ 0.92
BEST1O76090 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.8■□□□□ 0.92
BEST1O76090 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.8■□□□□ 0.92
BEST1O76090 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BEST1O76090 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BEST1O76090 AP006587.1-201ENST00000534129 1502 ntBASIC20.8■□□□□ 0.92
BEST1O76090 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms