Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
RFPL1O75677 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.86■□□□□ 0.77
RFPL1O75677 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.86■□□□□ 0.77
RFPL1O75677 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFPL1O75677 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.86■□□□□ 0.77
RFPL1O75677 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFPL1O75677 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.85■□□□□ 0.77
RFPL1O75677 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFPL1O75677 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFPL1O75677 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFPL1O75677 AC073210.2-201ENST00000430369 194 ntBASIC19.85■□□□□ 0.77
RFPL1O75677 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFPL1O75677 TERF1P5-201ENST00000477545 1207 ntBASIC19.85■□□□□ 0.77
RFPL1O75677 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.85■□□□□ 0.77
RFPL1O75677 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.85■□□□□ 0.77
RFPL1O75677 MIR4651-201ENST00000582622 73 ntBASIC19.85■□□□□ 0.77
RFPL1O75677 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RFPL1O75677 AL591742.1-201ENST00000604433 565 ntBASIC19.85■□□□□ 0.77
RFPL1O75677 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFPL1O75677 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFPL1O75677 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.85■□□□□ 0.77
RFPL1O75677 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RFPL1O75677 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
RFPL1O75677 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFPL1O75677 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.84■□□□□ 0.77
RFPL1O75677 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFPL1O75677 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 KRT8P17-201ENST00000453110 1448 ntBASIC19.84■□□□□ 0.77
RFPL1O75677 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.84■□□□□ 0.77
RFPL1O75677 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFPL1O75677 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.83■□□□□ 0.77
RFPL1O75677 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RFPL1O75677 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL1O75677 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RFPL1O75677 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL1O75677 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL1O75677 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
RFPL1O75677 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.83■□□□□ 0.77
RFPL1O75677 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL1O75677 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL1O75677 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.83■□□□□ 0.77
RFPL1O75677 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.83■□□□□ 0.77
RFPL1O75677 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.83■□□□□ 0.77
RFPL1O75677 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFPL1O75677 AC016405.3-201ENST00000607710 860 ntBASIC19.83■□□□□ 0.77
RFPL1O75677 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFPL1O75677 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFPL1O75677 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.83■□□□□ 0.76
RFPL1O75677 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.83■□□□□ 0.76
RFPL1O75677 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFPL1O75677 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.83■□□□□ 0.76
RFPL1O75677 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RFPL1O75677 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFPL1O75677 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFPL1O75677 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.82■□□□□ 0.76
RFPL1O75677 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFPL1O75677 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.82■□□□□ 0.76
RFPL1O75677 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.82■□□□□ 0.76
RFPL1O75677 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RFPL1O75677 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.82■□□□□ 0.76
RFPL1O75677 AC013268.1-206ENST00000638368 961 ntBASIC19.82■□□□□ 0.76
RFPL1O75677 AC112229.1-201ENST00000639295 961 ntBASIC19.82■□□□□ 0.76
RFPL1O75677 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RFPL1O75677 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RFPL1O75677 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFPL1O75677 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.82■□□□□ 0.76
RFPL1O75677 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFPL1O75677 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms